Rhizobium lentis: J0663_18415
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Entry
J0663_18415 CDS
T07189
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rln
Rhizobium lentis
Pathway
rln03410
Base excision repair
rln03430
Mismatch repair
rln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0663_18415 (recJ)
03430 Mismatch repair
J0663_18415 (recJ)
03440 Homologous recombination
J0663_18415 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rln03400
]
J0663_18415 (recJ)
DNA repair and recombination proteins [BR:
rln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J0663_18415 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J0663_18415 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J0663_18415 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QSW93030
LinkDB
All DBs
Position
3813764..3815566
Genome browser
AA seq
600 aa
AA seq
DB search
MADLVDPVQRAFLGVEKSVLDNRWVARLDQAGQNRALAMSQIHGLPDLITRVLAGRGVSV
DEAIEFLDPTIRSLMPDPHTLTDCEKAATRLVSAIERGESVAIFGDYDVDGAASSSLMFR
FLSHFGVTANIYIPDRIFEGYGPNPAAINQLIDNGARLIVTVDCGSTSHEALAAAAARGV
DVVVIDHHQVTHELPPCHALVNPNREDDLSGQGHLCAAGVVFMVLVATLRLLRAAGNKRI
LALDLLQWLDIVALATVCDVVPLKGLNRAYVVKGLVAARHQSNAGLAALFRKAGLAGPVT
PYHFGFLIGPRINAGGRIGDAALGSRLLTLDDAGEAEVIAQRLDELNRERQAMEAMMLQE
AEAEALAEYGDGEGASVIVTAHEKWHPGIVGLIAARLKEKFKRPAFAIAFDPSGRGTGSG
RSINGFDMGRMVRAAVDEGILVKGGGHAMAAGLTVERADLGRLRSFFTEKAARTVASLVA
NETLKIDGAIGASGATLELIDRLEAAGPYGSGHSQPVFAVPAHRVRDARLVGEKHVKVTL
EAMDGSRLDGIAFRAADTALGGLLLNSRGASLHVAGSLGADHYQGARRIQLRVCDAAPAK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctcgtcgatccggtacagcgtgcgtttctgggcgtggagaaatccgtgctc
gataatcgctgggttgcaaggctcgaccaggccggtcagaaccgggcgctcgccatgtcg
cagatccacgggctgccggatctgatcacccgcgttcttgctggacgcggtgtctcagtg
gacgaagcgatcgaattcctcgatccgacgatccgcagcctgatgcccgatccgcacacg
ctgaccgattgcgagaaggcggcaacccgcctcgtgagtgcgatcgagcgcggcgagagc
gtggcgatttttggcgactatgacgtcgacggcgcggcctcctcgtcgctgatgttccgc
tttctcagccatttcggcgtcacggcgaacatttacattcccgaccgcatctttgaaggt
tatggccccaatccggctgcgatcaaccagctgatcgacaatggcgccaggctgatcgtt
accgtcgattgcggctcgaccagtcacgaggcgcttgcggccgccgccgcgcgcggtgtc
gatgtcgtggtcatcgatcaccaccaggtgacacacgagctgccgccttgtcatgcgctc
gtcaatcccaaccgcgaggacgatctttcagggcaggggcatctttgcgcagccggcgtc
gttttcatggtgctggtcgcgacgttgcggctgctgcgtgcggccggcaacaaacgcatc
ctggcgctcgacctcctgcaatggcttgacattgtggcgcttgcgacggtctgcgatgtc
gtgccgctgaagggcctcaaccgcgcctatgtcgtgaaggggctggtcgctgcccgacac
cagagcaatgccgggcttgctgcactgttccgcaaggcggggctggccggcccagttact
ccttatcatttcggctttctgatcggcccgcgcatcaatgccggcggacgcatcggcgac
gccgccctcggaagccgcctgctgacgctcgatgatgccggtgaagcggaggtgatcgcg
cagcgcctcgacgagctcaaccgtgagcgtcaggcgatggaggccatgatgctgcaggag
gcggaggccgaggcgctcgccgaatatggcgacggcgagggtgcctccgtcatcgtcacc
gcccatgagaagtggcatcccggcatcgtcgggctgattgcggcgcggctgaaggagaag
ttcaagcggcccgccttcgcaatcgccttcgatccctccggccgcggcaccggctcaggc
cgctccatcaacggcttcgatatgggccggatggtgcgggctgcagtcgatgagggcatc
ctcgtcaagggcggcggtcacgccatggccgccggactgacggtcgagcgcgccgatctc
ggcaggctgaggagtttcttcaccgagaaggccgcaaggacggtggcgagcctcgtcgcc
aacgagacgttgaagatcgacggcgcgatcggcgcaagcggcgccactctcgaactcatt
gatcgcctggaggctgccggaccttacggctcaggccactcccagccggtctttgccgta
ccggcgcatcgcgtgcgtgacgcgcgccttgtcggcgagaaacatgtgaaggtaacgctg
gaggcgatggacggatcgcggctcgatggaatcgccttccgcgccgccgatacggccctc
ggcggtctgctgctcaattcgcgcggcgcgagtctccatgtcgccggctcgctcggcgcc
gatcattaccagggcgcacgccgcatccagctgcgcgtctgcgatgcagcgccggcgaaa
tag
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