Rhizobium lentis: J0663_23580
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Entry
J0663_23580 CDS
T07189
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rln
Rhizobium lentis
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rln03000
]
J0663_23580
Transcription factors [BR:
rln03000
]
Prokaryotic type
Helix-turn-helix
LacI family
J0663_23580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
DUF7317
HTH_31
HTH_IclR
HTH_3
HTH_Tnp_ISL3
Sigma54_DBD
Sigma70_r4
HTH_6
HTH_10
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QSW96540
LinkDB
All DBs
Position
p1:complement(303363..304361)
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AA seq
332 aa
AA seq
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MEFKHQATVTLAEVAEAAGVGESTVSRVLRNHGSFSGRTRERVMAAVERLGYVPNRIAGT
LASTGSRLVAFVIPSLSNIVFPDVLRGASAVLEENRYQAVFSVTDYDPAKEEALAAAMLA
WRPAAVMLAGYEHTEGTAKMLRASGCRVVELLDLDGDPLDIAVGFSNRAAGQESAAFLLR
RGYRRIGYVGHDLDRDTRAGKRFLSFCETLEANGTPLIAREILASASSVENGKQGLERLL
ARATDLDAVYFSNDDMALGGYFHCLAQGIAIPSQLAIFGYNGLDIGRAIPQPLSTIRTPR
VATGQIAAQLVIANAPPQAIDLGFELIEGATA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaattcaaacatcaggcgacggtaacgcttgccgaggtcgcggaagcggccggtgtc
ggtgaaagcacggtgtcgcgtgtgctgcgcaaccacggttcgttttccggcaggacgcgg
gagcgggtgatggctgccgtcgagcggctgggctatgtgccgaaccggattgccgggacg
ctggcctccaccggttcgcgtctggtcgccttcgtcattccctcgctctcgaacatcgtc
tttcccgatgtgctgcgcggcgccagcgccgtcctggaagaaaaccgctaccaggcggtg
ttctccgtcaccgattatgatccggccaaggaggaagcgctcgccgccgcgatgcttgcc
tggcgcccggcggcagtgatgttggcgggctacgagcataccgagggaacagcgaagatg
ctgcgtgccagcggatgccgggtggtggagttgctcgatttggacggcgatcccctcgat
atcgccgtcggcttctcgaaccgcgcggccggacaggagagcgctgccttcctgctccgg
cggggctaccgacggatcggctatgtcggtcacgacctggaccgcgacacccgtgccgga
aagcgttttttgagcttttgcgaaactctcgaagctaacggaactccacttatcgctcgc
gaaatcctggcgagcgcttcgtcagtggaaaacggcaagcagggactggagcgactgttg
gcacgagcgaccgacctcgatgcggtctacttttccaacgatgacatggcgctcggcggt
tattttcactgtctcgctcaagggatcgccatcccctcgcagctcgccatattcggctat
aacggtctcgatatcggccgggcaatcccgcaacctttatcgaccatccggacgccgcgt
gtggcaacggggcagattgccgcgcagctggtcatcgccaatgcgccgccgcaggccatc
gatctcggttttgaactgatcgaaggggcaactgcgtaa
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