Rhizobium lentis: J0663_30760
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Entry
J0663_30760 CDS
T07189
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
rln
Rhizobium lentis
Pathway
rln02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J0663_30760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rln03000
]
J0663_30760
Transcription factors [BR:
rln03000
]
Prokaryotic type
Helix-turn-helix
IclR family
J0663_30760
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
Dimerisation
HTH_27
Motif
Other DBs
NCBI-ProteinID:
QSW97430
LinkDB
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Position
p4:complement(200347..201174)
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AA seq
275 aa
AA seq
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MSSTRRAAGEDTAVGKSVDSVPALRRAVSILDLVTNSGDAMSAADITRAMSLPKSTAHGL
LGVMIELGLLVRKQDGTYRLGPHPMRWAHGFLSEMDIVSIFRNYFASDTTLSPYTVTLTT
LDRDEVVYIDCRNSDQPLGHTFRIGMRLPATFTATGKMLLSEMPEDKLEALFSANFPPPI
TSRSVKNLGLLRQELADIRTRGFSIDNGQVREGMICIGTAVRDHTRCAVAGIAISLLESE
TTPALIESLGETMRRSAAILSEQLGHNSSSHFRDE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaagtacacgacgcgccgcaggggaagacactgcggtcggaaaatccgtcgattct
gttccggcgctcaggcgcgcggtttcgatcctcgatcttgtcaccaattctggcgacgca
atgtcggccgccgacatcacacgggcgatgtcgctgccaaagagtacggcgcacgggcta
cttggtgtcatgattgagcttggcctgctcgttcgcaaacaggacggcacgtaccgcctc
ggcccccatcctatgcgctgggcgcacggctttctgtccgagatggacattgtctcgatt
ttccgaaattacttcgcttccgataccacattgtcgccttacacagtcacattgacaact
cttgaccgtgacgaggtcgtctatattgattgccgaaattccgaccagcccctgggccat
actttccggattggaatgcgtcttcctgccacctttaccgcgaccggcaaaatgctgctt
tccgaaatgccggaagataaactcgaggcgctgttcagcgcaaactttcctccgcccatc
acctcgagaagcgtcaaaaatcttggcttgctaaggcaggagctagctgacatccgtacg
cgcggtttttcgatcgataacggtcaggttcgcgaagggatgatttgcatcggcaccgct
gtgcgggatcacacgcgatgcgcggttgccggcattgccatcagccttctggaaagcgaa
acaactccggcgctcatcgagtcactcggagagacgatgcgcagatcagccgccattctt
tctgagcaattggggcataacagctcatcacacttccgtgacgaatga
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