Rhodocaloribacter litoris: GQ464_001030
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Entry
GQ464_001030 CDS
T09819
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rlo
Rhodocaloribacter litoris
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_001030
DNA repair and recombination proteins [BR:
rlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GQ464_001030
Archaeal homologous recombinant proteins
GQ464_001030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_29
AAA_15
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QXD15559
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All DBs
Position
complement(261991..265050)
Genome browser
AA seq
1019 aa
AA seq
DB search
MVPVALRLHNFLSYGTAAPTLDFEQFRVACLSGRNGQGKSALLDAITWALWGEARKSSDS
RKPDDDLLRIGARRMQVELVFDLEGTRYRVLRWYEKTKTGKTSKPGLEVHVFDPAQDDYR
PLTGASIRETQQVLNNILGLDYDTFINSAFLLQGRSDEFTKKRPAERKQILARILNLGRY
DRLAEMARERLRKAEADVDLAEREIERLKNALAGEPAWKEEHARVEAQIAEEAATLERLR
AEERQLAERLAALEARAQEALTTREALDGLDRRRHADEEERRQLLERIREADALIARQAE
IEREHQRYETLRKTYDDLLDRQHLYEAVEKQIRQQREELKDRKNALENQIHRLTVELKAD
RDELSRCEAELVELPAVRRQLEAARTAARQFKDLTDVLTRRRRLEEEITAAEQRLMQERE
ALGGRLHALEAGIEREAATLPDPDGLEQERQACAAAVDRHRQLQEALDRIRQEGQALREQ
IREREGLMKARQESLKKQEEALRRLLDFEEEACPTCGTPLTPAHRAEVEARYRTEMDRLR
KELEEMQHGIEEKMAARQTLLDRYRAVENEARQLADRVASLAAIEQRIAHARTAQEALAA
RRKEAEALRRRLADEDFGHEVRARLQTLRERLDACPFDEAAYERLRDQAGQVERFEEKLR
RLEEVAGRKQQLEQRLQRKEPELETLRTRLDDGSVFGPIQEQIRHLEARQAEIGFDPARL
EEVRRMLREVEKAGERMKELLHARANRADWKEQVARIDERLARAKAEREALAGRLTRLEA
DLAGRDELVRRQRELAAACAGREQALSDLHTRAGELRSRLEQARQDREALTAQRKAHAAA
RTERTIYRHLRAAFGKHGIPSLIIEQTLPEIEERANELLARLTDGKMYVHLETLKDKKTG
GTKETLEIIITDEQGVPRPYETFSGGEAFRVNFALRIALAQLLAERSGVRVRTLVVDEGF
GTQDEQGVENMVEAIQTIQDDFDKIIVITHLDQLKEAFPVRIEVEKDPVEGSRFQMIGV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtacccgtcgcgctacgcctgcacaactttctcagctacggcaccgccgcgccgacg
ctcgacttcgaacagttccgcgtggcctgtctctccgggcgcaacgggcagggtaagtcg
gccctgctggatgcgatcacctgggcgctctggggggaggcccgcaagtcgagcgacagc
cgcaagcccgacgacgatctgctgcgcatcggagcccggcgcatgcaggtcgagctcgtc
ttcgacctcgagggaacccgctaccgcgtcttgcgctggtatgagaagacgaagacgggt
aagacgagcaagcccggcctcgaggtacacgtcttcgacccggcccaggacgactaccgg
cccctcaccggggcctcgatccgcgagacgcagcaggtcctgaacaacattctggggctc
gactacgacaccttcatcaactcggccttcctgctgcaggggcgttccgacgagttcacg
aagaaacggcctgccgagcgcaagcagatcctggcccgcatcctgaacctgggccgctac
gatcgcctggccgagatggcccgcgagcgcctccgcaaggccgaggcggacgtcgacctg
gccgaacgcgagatcgagcgcctcaagaacgccctggccggggagcccgcctggaaggag
gagcacgcccgggtggaggcgcagattgccgaggaggcggcgacgctcgaacggctccgg
gccgaggaacggcagctggccgaacgcctggccgccctcgaggcccgggcgcaggaagcc
ctcaccacccgggaagccctcgacgggctcgaccggcgccgtcacgccgacgaggaggag
cggcggcaacttctggaacgcatccgggaagccgacgccctcatcgcccggcaggcggag
atcgagcgggagcaccagcgctacgaaaccctccggaagacgtatgacgacctcctcgac
aggcagcatctctacgaggccgtcgagaagcagatccggcagcaacgggaggagctgaag
gaccggaagaacgcgctcgagaaccagatccacagactgaccgtcgagctgaaggcagat
cgggacgagctgtcccggtgcgaggccgagctggtcgagttgccggccgtacggcgacag
ctggaggcggcccggaccgcggcccggcagttcaaagacctgaccgacgtgctcacccgg
cgacgccggctggaggaggagatcaccgccgccgagcagcgcctgatgcaggaacgggag
gccctcggcgggcggttgcacgcgctggaggccggcatcgagcgcgaagccgccaccctg
cccgaccccgacggcctggagcaggaacggcaggcctgcgcagcggccgtggaccggcac
cggcaactccaggaagcgctggaccggatccgacaggaagggcaggcgttgcgcgagcag
atcagggagcgggagggcctgatgaaggcccgtcaggaaagcctgaaaaagcaggaggaa
gcactgcgccggttgctcgacttcgaggaggaggcctgccccacctgtggcacgccgctc
accccggcacaccgggccgaggtggaagcccggtaccgaaccgaaatggatcggctccgg
aaagagctggaggagatgcagcacgggatcgaggaaaagatggcggctcgccagaccctg
ctcgatcggtaccgggccgtggagaacgaggccaggcaactcgccgaccgggtcgcatcg
ctggcggcgatcgagcagcgcatcgcccacgcccgtacggcgcaggaggccctggcggca
cgccgcaaggaggccgaggccctgcgccgccgcctcgccgacgaggatttcgggcacgag
gtgcgggcacggctccagaccctgcgcgagcgtctcgacgcctgtcccttcgacgaggcg
gcctacgagcgcctgcgcgaccaggccggccaggtggaacggttcgaggaaaagctccgg
cggctggaggaggtggccggtcgcaagcagcagctcgaacaacgccttcagcggaaggag
ccggagctggaaaccctgcgtacccggctcgacgacggctcggtcttcggacccatccag
gagcagatccgccacctggaggcccggcaggccgagatcggcttcgacccggcccgcctg
gaggaggtgcgccggatgctccgggaggtcgagaaggccggcgagcggatgaaggagttg
ctgcacgcccgcgccaaccgggctgactggaaagagcaggttgcccggatcgacgagcgc
ctggcgagggcgaaggcggagcgggaggcgctggccgggcggctcacccggctcgaggcc
gacctggccgggcgcgacgagctggtccgccggcagcgtgagctggccgcggcctgtgcc
gggcgggagcaggccctgagcgacctgcacacccgggccggcgagctgcgctcccgtctc
gaacaggcccggcaggaccgcgaagccctcacggcacagcggaaggcccacgccgccgca
cgcaccgaacgtaccatctaccggcatctccgcgccgccttcggcaagcacggcatcccg
tcgctcatcatcgaacagaccctgcccgagatcgaagagcgcgccaacgagctgctcgcc
cgcctgaccgacggcaagatgtacgtccacctcgaaacgctcaaggataagaagaccggc
ggaaccaaagagacgctcgagatcatcatcaccgacgaacagggggtgccgcggccctac
gagacgttctccggcggggaagccttccgcgtcaacttcgccctccgcatcgccctggcc
cagctcctggccgagcgcagcggcgtccgcgtgcgcaccctcgtcgtcgacgaaggcttc
ggcacccaggacgaacagggcgtggagaacatggtcgaggccatccagaccatccaggac
gacttcgacaagatcattgtcatcacccacctggatcagctcaaagaggcttttcccgtg
cggatcgaggtggagaaggatcccgtcgaaggatcccgtttccagatgatcggcgtctga
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