Rhodocaloribacter litoris: GQ464_001765
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Entry
GQ464_001765 CDS
T09819
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rlo
Rhodocaloribacter litoris
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlo03032
]
GQ464_001765 (topA)
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_001765 (topA)
Enzymes [BR:
rlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GQ464_001765 (topA)
DNA replication proteins [BR:
rlo03032
]
Prokaryotic type
DNA Topoisomerases
GQ464_001765 (topA)
DNA repair and recombination proteins [BR:
rlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GQ464_001765 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXD15696
LinkDB
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Position
complement(437846..440425)
Genome browser
AA seq
859 aa
AA seq
DB search
MKRLVVVESPTKARTIRRFLPGNEFEVEASMGHVRDLPASAAEIPERFKQAPWARLGVDV
AHDFQPLYVIPPDKKKVVRQLKEALKEADELYIATDEDREGESIGWHLLEVLKPRVPVRR
MVFHEITREAILEALEKTRDMDQHLVDAQETRRILDRLFGYTLSPLLWKKIAPRLSAGRV
QSVAVRLLVHREKERIAFVPASYWTLKALLEQAGEAFEAQLTHVRGLRIATGRDFDDHTG
RLKDGLVPGRDLVLLEEAEARRLAGRLPSGPWRVTNVNARTETRSPYPPFITSTLQQEAS
RKLGFSARKTMQVAQHLYEQGYITYMRTDSTNLSQEAVEAARRAVAGRYGEEYLSPAPRQ
FTGKVRNAQEAHEAIRPAGREMKTAEELGLTGPEGALYDLIWKRTVATQMADARLRLVTV
TLEAGEGEERATFRASGKTILFPGFFRAYVEGSDDPEAALEDREQPLPDLREGDRPACRR
VEPLGRETKPPARYTEATLIKTLEKEGIGRPSTYATIIDTIVERGYVRRQGNQLVPTFTA
FATNNLLETQFARLVDVGFTARMEQALDDIASGQRRPVPYLRQFYSGEDGLEKRVEKGLD
TIDARQVATIHFPQWGPYKVRVGRYGPYVEYEDGDERVTASLPDDLVPGDVTEETLAELI
RKASSQDDGLLGLHPETRRPVFLKEGPYGPYVQLGENDEPGGPKRVSLPKGLAPEEVTLA
VAVELLRLPRTLGAHPETGQPVVANIGRYGPYVQHGKTFASLTGDDDVLTVDLDRALELI
ARKEAKNKPLRELGPHPETGEPVTVWNGRYGPYVKHQRLNASLPDGLDPEALTMEEALRL
LEERAASKGKGKKRRSRRA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactggtcgtcgtcgaatcgcccacgaaggcccgtaccatccgccgctttctg
cccggcaacgagttcgaggtggaagccagcatggggcacgtccgggacctgcccgcctcg
gccgccgagatcccggagcgtttcaagcaggcgccctgggcccggctcggggtggatgtg
gcccatgattttcagcccctctatgtcattccacccgacaagaagaaggtcgtccgccag
ttgaaggaagcgctgaaagaggcggacgagctctacatcgccacggacgaggaccgggag
ggggagtccatcggctggcacctgctcgaggtgctcaaaccgcgcgtgcccgtccgccgg
atggtttttcatgagatcacccgcgaggccatcctggaggcgctcgaaaagacgcgggac
atggaccagcacctggtcgatgcccaggagacgcgccgcatcctggaccggctcttcggc
tacacgctttcgccgctgctctggaagaagatcgccccgcgcctctcggccgggcgggtg
cagagcgtggccgtgcgcctgctggtccatcgcgagaaggagcgcatcgccttcgtgccg
gcctcgtactggacactgaaggcgctcctggagcaggcgggcgaggcgttcgaggcccag
ctgacgcacgtgcgcggcctgcgcattgccacggggcgcgactttgacgaccacaccggc
cggctgaaggacgggctcgtgccgggacgcgacctcgtgctgctggaggaggccgaagcc
cgtcgcctggccgggcggctgccgtcggggccctggcgcgtcacgaacgtcaacgcccgc
accgagacacgttcgccctacccccccttcatcacctcgacactccagcaggaggccagc
cgcaagctcggcttctcggcacggaagacgatgcaggtggcgcagcacctctacgagcag
ggctacatcacctacatgcgcaccgactcgacgaacctctcacaggaagccgtcgaggcc
gcccggcgggccgtcgccgggcgctacggcgaggaatacctgagcccggcgccccggcag
ttcacgggcaaggtgcgcaatgcccaggaggcccatgaggccatccgccccgccgggcgc
gagatgaagaccgccgaagagctgggcctgaccggtccggagggcgccctctacgacctg
atctggaagcgtaccgtcgccacccagatggcggacgcccggctgcgcctggtcacggtc
acgctcgaggcgggcgaaggggaggagcgcgccacgttccgcgcttcgggcaagaccatc
ctgttccccggcttcttccgcgcctacgtcgagggcagcgacgacccggaagccgccctc
gaagaccgtgagcagccgctgcccgacctgcgcgagggcgaccggcccgcctgccggcgc
gtcgaacccctggggcgcgaaacgaagccgccggcccgctataccgaggccaccctcatc
aagaccctcgagaaggaaggcatcgggcgtcccagcacctatgccaccatcatcgacacc
atcgtggagcggggctacgtgcgccggcagggcaaccagctcgtgcccaccttcaccgcc
ttcgccacgaacaacctgctcgagacccagttcgcccgcctcgtcgacgtcggcttcacg
gcgcgcatggaacaggccctcgacgacatcgcctcgggccagcgccggcccgtcccctac
ctgcgccagttctattcgggggaggacggcctcgaaaagcgtgtggagaaggggctcgac
accatcgacgcccggcaggtggccaccatccacttcccgcaatggggaccctacaaggta
cgcgtcgggcgctacgggccgtacgtcgagtacgaggacggcgacgagcgggtcaccgcc
tcgcttccggacgacctcgtgcccggcgacgtgaccgaggaaaccctcgccgagctcatc
cggaaagccagcagccaggacgacgggctcctgggcctccatcccgaaacgcgacgcccc
gtcttcctcaaggaaggaccctacgggccctacgtgcagctcggtgagaacgacgagccc
ggcgggccgaagcgcgtctcgctgccgaaaggactggccccggaggaagtgacccttgcc
gtggccgtcgagttgctccggttaccccgtaccctgggtgcccatcccgagaccggccag
ccggtcgtggccaacatcggccggtacgggccctacgtgcagcacggcaagacgttcgcc
tccctcacgggcgacgacgacgtcctcaccgtcgacctggaccgggcgctcgaactcatc
gcccggaaggaagcgaagaacaagccgctgcgtgagctggggccgcacccggaaacgggc
gagccggtgacggtctggaacggccggtacgggccctatgtgaaacaccagcgcctgaac
gcttcccttccggacggtctcgatcccgaggcgctgacgatggaggaagccctccggctc
ctcgaagaacgggctgcctcgaaggggaaagggaaaaagcgccggagccgccgggcctga
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