Rhodocaloribacter litoris: GQ464_002150
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Entry
GQ464_002150 CDS
T09819
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rlo
Rhodocaloribacter litoris
Pathway
rlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GQ464_002150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlo03019
]
GQ464_002150
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_002150
Enzymes [BR:
rlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GQ464_002150
Messenger RNA biogenesis [BR:
rlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GQ464_002150
DNA repair and recombination proteins [BR:
rlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GQ464_002150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Myb_DNA-binding_2
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QXD15771
LinkDB
All DBs
Position
complement(531370..533394)
Genome browser
AA seq
674 aa
AA seq
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MPRRPTDEAAEAPEDRPDAWRERAAEVLRRYWGHSAFRPGQWEAMAAVLAGRDVLAVLPT
GAGKSACYQVPALLSKGLTLVVSPLIALMQDQVAGLNARGIPATFINSTLSAREIDQRWT
DAEYGRYRLLYVAPERLQTDLFEARAGRFNVSLLAVDEAHCISEWGPHFRPAYLQIARAH
ALLGAPPVIAVTATATPQVRRDIVAHLGLRDPAVIVRGFDRPNIVWSIFRTENKRDKVLE
VVRSVPGSGIVYAATRHGVERWAAWLREQGEPAAAYHAGLDAGSRATVQEAWLRDETRLI
VATNAFGMGIDKPDVRFVLHVDVPASLESYYQEAGRAGRDGRRAYAVLLFHPPDEATQRA
LIAEAHPAAREVRAVYDAACNLARIPVASRPETPVTLDLEAIARLTGFGTGKVRAAIELL
ARQETWHPVPVRPHHGLIRFLQPANAVRDLARRLENRALAGFVEALLRTVHADAFTAWWE
IDVRLLQARTRLPRARLFRGLAFLEERGLLAWQPPGRALQVLFAEPRSARLPVDDVQVRR
ARRRAEARLADMLRYARSVTCRRHFLLAYFGETAPPRCGTCDVCLGRHRPVVITPEDEPV
MRQILHRVAHDVPRRRWFAEPPVPGHHLDGLVDWLVQEGYLQAIDPLEERFALTEKARDL
LDQWEPRDDGTPPR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtcgcccaacggacgaagccgccgaggccccggaggaccggccggacgcatgg
cgcgagcgcgcggcagaggtgctccggcgatactgggggcactccgcgtttcgcccgggc
cagtgggaggccatggccgcggtgctggccgggcgggacgtgctggccgtgctgccgacc
ggtgcgggcaagtcggcctgctaccaggtgccggccctgctgtcgaaggggctcacgctc
gtcgtgtctccgctcatcgcgctgatgcaggatcaggtggcggggctgaatgcacggggc
atcccggcgacgttcatcaacagcaccctctccgcccgcgagatcgaccagcggtggacg
gacgccgaatacgggcgctaccggctgctctacgtcgcacccgaacgcctgcagaccgac
ctcttcgaggcccgcgccgggcggttcaacgtgtcgttgctggcggtggacgaggcgcac
tgcatcagtgaatggggcccccacttccgcccggcctacctgcagatcgcgcgggcccac
gcgctgctcggcgccccccccgttatcgccgtgacggcgacggctaccccgcaggtgcgc
cgcgatatcgtcgcgcacctgggcctgcgcgatccggccgtcatcgttcgggggttcgac
cgccccaacatcgtctggagcatcttccgcacggagaacaagcgggacaaggtgctggag
gtggtacgcagcgtgccgggcagcggcatcgtgtatgcggccacccggcacggggtcgag
cggtgggcggcctggctgcgggagcagggcgagccggcggcggcctaccacgcgggcctc
gacgccggctcgcgcgcgaccgtgcaggaggcctggctccgggacgagacgcgcctcatc
gtcgccacgaacgccttcgggatgggcatcgacaagccggacgtgcgcttcgtgctgcat
gtggacgtgcccgcctccctggagagctactatcaggaggcgggccgggccgggcgcgac
ggccgccgggcctatgcggtgctgctgttccacccgcccgatgaggccacccagcgcgcc
ctcatcgccgaggcccacccggcggcccgggaggtgcgggccgtctacgacgccgcctgc
aacctggcccgcatccccgtggcctcccgccccgagacgccggtgacgctcgacctcgaa
gccatcgcccggctgaccggcttcggaaccggcaaggtacgcgccgccattgaactcctg
gcacggcaggaaacctggcatccggtgcccgttcgcccccatcacggcctgatccgcttc
ctccagccggccaacgccgtgcgagacctggcccggcggctggaaaaccgcgccctggcc
ggcttcgtcgaggccctgctgcgtaccgtccacgccgatgcgttcacggcctggtgggag
atcgacgtgcggctgctgcaggcccgcacccggctgccgcgcgcgcggctctttcgcggg
ctcgccttcctggaagaacgcgggctgctggcctggcagcctccgggcagggccctgcag
gtgctcttcgccgagccccgctcggcacgcctgccggtggacgacgtgcaggtgcgccgg
gcccgtcgccgcgccgaggcacgcctggccgatatgctgcgatacgcccgctcggtcacc
tgccggcggcacttcctcctggcttacttcggcgagaccgccccgccccgctgcggcacg
tgcgacgtctgcctggggcggcaccggcccgtggtcatcacccccgaagacgaaccggtc
atgcggcagatcctccaccgggtggcgcacgacgtgccccgccggcgctggttcgcggag
ccgcccgtgcccgggcaccacctcgacggcctggtcgactggctcgtgcaggaaggatac
ctccaggcgatcgatccgctggaggagcgcttcgcgctcaccgagaaagcccgggacctc
ctcgatcaatgggaaccgcgcgatgacggaacaccgccccgctga
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