Rhodocaloribacter litoris: GQ464_002165
Help
Entry
GQ464_002165 CDS
T09819
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rlo
Rhodocaloribacter litoris
Pathway
rlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GQ464_002165 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlo03019
]
GQ464_002165 (recQ)
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_002165 (recQ)
Enzymes [BR:
rlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GQ464_002165 (recQ)
Messenger RNA biogenesis [BR:
rlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GQ464_002165 (recQ)
DNA repair and recombination proteins [BR:
rlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GQ464_002165 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
HRDC
DEAD
RecQ_Zn_bind
ResIII
HEM4
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QXD15774
LinkDB
All DBs
Position
536696..538588
Genome browser
AA seq
630 aa
AA seq
DB search
MSPASSARADAVFSLPEVLSVVRRYWGYDRLRPLQEEAIRAGLEGRDALVVMPTGGGKSL
CYQVPPLLAGRMDVVISPLISLMKDQVDGLRANGYPAATLHSALSAAQKREALDLIARGA
CRLLFLSPERVLTPWFFELAERHHIRTFAVDEAHCISHWGHDFRPEYRRLAQIKERFPEA
TLHAYTATATERVRQDIITQLRLRDPDVLVGRFDRPNLIYRVFPRLNLREQLLDVLDRHR
GEAVIVYCITRDETERLAASLREAGFRAAAYHAGMPAGDRRAAQEAFTNEEIDVIVATVA
FGMGIDRSDVRCVIHAGMPQSVEHYQQETGRAGRDGLAAECILFYSPADTLRWQSLIEKR
GANTGEHTRAHRTRHAARHALRLLAHMRRFAAPGQCRHKSLSEYFGQPYERENCGACDVC
LDEVEQFVDGTTEAQMILSCVVRTGERFGAGHLADILRGSDTERIRKLGHDRLSTFGLLK
DRPKNEINHMIFQLVDQGLLTRTPGDYPILKLNDASWEVLRGQRTVWLLPAKKKAVRRTA
VETASWEGVDRRLFERLRRLRTEIARERGLPPYVIFNDTTLRDMARQRPTTPAALLRVHG
VGEKKLADFGERFLAVIAGQDGRSPGPAGP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctgcttcgtccgcccgtgccgatgccgtcttcagcctgccggaggtgctgtcg
gtcgtacgccggtactggggctacgaccggctacgaccgttgcaggaggaggccatccgg
gccgggctcgaaggccgtgatgccctggtggtgatgcccaccgggggcggcaagtcgctc
tgctaccaggtaccgccgctgctggccggccggatggacgtggtcatctccccgctcatc
tccctgatgaaggaccaggtggacgggctgcgggccaacggctatccggcggcgaccctg
cacagcgccctgagcgccgcccagaagcgtgaggccctggacctcatcgcgcgcggcgcc
tgccgcctgctcttcctgtcccccgagcgggtgctgaccccctggttcttcgagctggcc
gagcggcaccacatccgcaccttcgccgtcgacgaggctcactgcatcagccactggggg
cacgacttccgccccgaataccggcggctggcgcagatcaaggagcgctttccggaagcc
accctgcacgcctacacggccaccgccaccgagcgcgtccggcaggacatcatcacccag
cttcgcctgcgcgaccccgacgtgctcgtcgggcgcttcgaccggcccaacctcatctac
cgcgtcttcccccggctgaacctgcgcgagcagctcctcgacgtgctggaccggcaccgg
ggcgaggccgtcatcgtctactgcatcacccgcgacgaaaccgagcgcctggcggcctcg
ctgcgggaagcgggcttccgggccgccgcctaccacgccggcatgccggccggcgaccgg
cgcgccgcccaggaagccttcaccaacgaggagatcgacgtcatcgtggcgacagtggcc
ttcggcatgggcatcgaccggagcgatgtgcgctgcgtcatccacgccggcatgccgcag
tcggtggaacactaccagcaggagaccggccgcgccgggcgcgacggcctggccgccgag
tgcatcctcttctattcccccgccgacaccctgcgctggcagtcgctcatcgagaagcgg
ggcgcgaacaccggggagcacacccgggcccaccggacgcgtcacgcggccagacacgcc
ctccggctgctggcccacatgcgccggttcgccgcccccggccagtgccgccacaaaagc
ctcagtgagtatttcgggcaaccctacgaacgggaaaactgcggtgcctgcgacgtctgc
ctggacgaggtggagcagttcgtcgacggaacgacggaggcccagatgatcctttcctgc
gtcgtgcgcaccggcgagcgcttcggcgccggtcacctggccgacatcctccggggcagc
gacaccgagcgcatccgcaagctcgggcacgaccgcctcagcaccttcggcctgctgaag
gatcgcccgaagaacgagatcaaccacatgatcttccagctcgtcgaccagggcctgctg
acgcgcacgccgggcgactaccccatccttaagctcaacgacgcctcgtgggaggtgctg
cgcggacagcgcaccgtctggctcctgccggcgaaaaagaaggccgtcagacgcacggcc
gtcgagaccgcctcatgggagggcgtcgaccgtcgcctcttcgaacggctccggcgcctg
cgcaccgagatcgcccgcgagcggggcctgccgccctacgtcatcttcaacgacaccacg
ttgcgggacatggcccggcagcgccccaccaccccggcagccctcctgcgcgtccacggc
gtcggcgagaagaagctggccgacttcggcgagcgcttcctggccgtcatcgccgggcag
gacgggcgctcccccggccccgcaggaccctga
DBGET
integrated database retrieval system
