Rhodocaloribacter litoris: GQ464_002295
Help
Entry
GQ464_002295 CDS
T09819
Name
(GenBank) AAA family ATPase
Organism
rlo
Rhodocaloribacter litoris
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
UvrD-helicase
AAA_16
UvrD_C_2
Viral_helicase1
AAA
AAA_22
TilS
Motif
Other DBs
NCBI-ProteinID:
QXD15800
LinkDB
All DBs
Position
557806..562230
Genome browser
AA seq
1474 aa
AA seq
DB search
MPSLKKKAISLYLRTGCQRQLLLNLYGDKERRELAMPPRQTVRAGLGLVGKAGYDWQDEK
VSELGTVFGAEHVHMNPKREGNRPGTLDLRDVLSRLTSYQFVVEGRFDPNTDTFRRAIGL
NELRDLQGEPLGVGNAFPDVVQVLPPMRERAAWEQEIKELGPGASGLEVLPGGDVHPLDE
HDGRLRLRVIDIKQTAEPGAHYFAEVVYYSMALAAWLVEYGHTDRFVVVATPAVWPGSYE
ASALMEVRERCRKAGREPTAEELALALEDDLEIAPFDVFAPRLRRFFREELPYVLQTPWD
ELPWHVSYACAGCDFLGYPWKDASGKLLNDPLHCWPTAEEKDHLSRVAGLSRGGARLLRP
VAANVAALAGVEADDVAFNASPTLRAKRTVYPHRARSLQTETAGVIPDSGSDALMPRWPD
LHVYVFLDYDLASAVTAAFSLRAFWKEPLPFGSVLETKRRRWAAVDNKMPTGFQEVFLVD
RRDLDREREELVKFLCTLRGILDEVRHLDDADVEAGRRGDPDEPEKAKRSTYQIYLWDEA
QRKHLVRVVGRHLGAVLSDTRLRDLAWLFPPPELLVHAEDASHKSPFTLVSDVVQNTVAV
PVPHHYTLLDVVQAYRPDPVAAPSVHPLYREPLSDLIPGERLHEMWTHRGDWLNTANTIR
ETTGKKLSALAYVVSQLERDLGSYLTRAAAPPVIRPPRRLTGVPPHSELWHEYTRLNKSL
EELDTLATRAMPPHEREARFKSAHLVRRLEGAEKAEALRHLAAASQHALPPADDLAVYTL
SPDSREFNVRPPALGYALSPRSQPAFLQGAAYPLVKDHDIHVPARLSGSVAEVGLTQVSV
EAIDRVRGLIALKQWYTNVVPEMEAAGVVDLSADVMLDPVSTDFLTKKVRATLLGIGRPP
SAQHDEATLRALGIDAPDTTPTSPESPASEFLWQAPVLAETEVDVDVAAARAALEASGVR
LNDSQWAAWEAALTRRLALIWGPPGTGKSQTLRAVVAGAVWLAHRAGKPLRLLIAAGTYA
AVDNVLLGADRLLAALLPEKPYRLVRIQSSYSELPVEQAEAHPDVETLTVKTTRAPEEVL
TLQGLLEHPEEIVVVAGPSQQLHNLALATKNKSKPRVSARPALTQRRWFDLVLIDEASQL
DVAESTLVVSKAADEAAFVLAGDDKQLPPIHQATPPQDLDHLVGSVYGYVRHHHGVAPCP
LQVNYRSCQTLVAFTKQAGYDPRLHAHHRDLRLALLTSRFPEERPEDWPAMLHWTPGWAA
LLAPSKPAACFIYEDEVASQANAFEADAVAALLRLFYGRVDRQLAGELDEDGREKPLTGR
PHDPEGFWNRAVGVVTPHRAQMGKIVARLQAAFPDHDPGLIWGAVDTVERFQGQQRDVIV
ASFGLGDPDLIRAEDEFLYSLNRFNVMASRARAKLIVFTTRSLVDHLSNDADVLEESRLL
KNFAESFCKDPQLLTLGYLDEGRLVERAGVLRTR
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
ttgccttcgctcaagaaaaaagccatctcgctctatctccgaacgggctgccagcgccag
cttctgctgaatctctacggcgataaggagcgacgggaattggcgatgccgccccggcag
acggtacgcgccgggctggggctcgtcggcaaggccggctacgactggcaggacgagaag
gttagcgagctcggcacggtcttcggggctgagcacgtgcacatgaatccgaagcgggag
ggaaaccgaccgggtacgctggacctccgggatgtgttatccaggctgacgtcgtatcag
tttgtcgtcgaagggcggttcgatccgaacacggacacgttcaggcgggccatcgggctc
aacgagctgcgggatctgcagggcgagccgcttggcgtcggcaacgcgttcccagatgta
gtgcaggtgttgcccccaatgcgggagcgggcagcatgggagcaggagatcaaagagctg
gggccgggggcttcagggctggaggtactgccgggcggcgacgtgcacccgctcgacgaa
cacgatgggcggctccgcctccgcgtgatcgacatcaagcagacggccgaacccggagcg
cactacttcgccgaggtcgtctactactcgatggcgctagcggcgtggctcgttgagtac
gggcacaccgaccgcttcgtcgtcgttgcgacgccggcggtttggccggggagttacgag
gcatcggcgctcatggaagttcgggagcggtgccgcaaagcggggcgcgagccgacggcg
gaggaactggcgctcgccctcgaggatgatcttgagatcgctccgttcgacgtcttcgcg
ccgcgtctgcggcggttcttccgcgaggagctcccctatgtgctccagacgccgtgggac
gagctgccgtggcacgtctcctacgcctgcgccgggtgcgatttcctcgggtacccctgg
aaagatgcgagcggaaagctcttgaacgaccccctccactgctggccgacggcggaggag
aaggatcacctctcgcgtgtggccggcctctcgcgtggcggcgccaggctgctccggccc
gtcgcggcaaacgtcgcggcgctcgccggtgtggaggcagacgacgtggccttcaacgcc
agcccgacgctccgggcgaagcggacggtctacccgcaccgggcgcggtcgctccagaca
gagaccgccggtgtgatcccggattcgggcagcgacgcgctcatgccacgctggccggac
ctacacgtgtacgtcttcctggactacgaccttgccagcgccgtgacggcggcgttcagc
ctgcgcgccttctggaaggagccactcccgttcggctcggtgcttgaaaccaagcgacgg
cgctgggcagccgtggataacaaaatgcctaccggcttccaggaagtcttcctcgtggac
cggcgcgacctcgaccgcgaacgggaggaactcgtcaagttcctttgcaccctgcgcggc
atcctcgacgaggtacgccacctcgacgacgccgacgtggaggcgggccggcgcggcgac
ccggacgagccggagaaagcgaagcgaagtacgtatcagatctacctctgggacgaggcg
cagcggaagcacctggtccgcgtggtgggccgccaccttggggccgtattgtcggacacc
cgtctgcgtgatctggcctggttgtttcctccacctgaactgctcgtacacgctgaagac
gcgtcgcacaagtcgcccttcacgctcgtctcggacgtggtgcagaacacagtggcggtg
cccgtcccccaccactacacgttgctggacgtcgtgcaggcgtatcgccccgacccggtc
gcggcaccgagcgtacacccgctctaccgggagccgctgagcgacctcatccccggcgag
cgcctccacgaaatgtggacgcaccggggcgactggctgaacacggccaatacgattcgg
gagacgaccgggaagaagctctccgcgctggcctacgtggtgagccagctagagcgggac
ctcgggtcctacctcacgcgggccgcggctccaccggtgatccggccgccccgacggctg
acgggtgtgccgccgcacagcgagctctggcacgagtacacccggctcaacaagtcgctg
gaggagctcgatacgctcgccacgcgtgcgatgcctccgcatgaacgggaggcgcggttc
aagagcgcgcacctcgtgcgtcgattggagggggccgagaaggcagaggcgctccggcat
ctcgcggcggcgagccagcatgccctgcctccggcggatgacctcgccgtctatacgctc
agcccggactcacgggagttcaacgtacgcccgcctgcgcttggttatgcactctcgcca
cggagccagccagccttcctgcagggtgcggcgtacccgctcgtgaaggaccatgacatc
cacgtgccagcgcggctgtcggggagcgtggcggaggtggggctcacgcaggtgtccgtt
gaggcgattgaccgcgtgcgggggctgatcgcactcaagcaatggtacacgaacgtcgtt
cctgagatggaggcggcgggcgtggtggacctgagtgcggacgtgatgctcgaccccgtg
agcacggacttcctcacgaagaaggtgcgtgcgacgctcctggggatcgggcgaccaccg
tcggcgcagcatgacgaggcgacgctccgggcgctcgggatcgacgcgcccgacacgacc
ccgacgtcgccagagtcgccggcttcggaattcctgtggcaggctccggtgctcgccgag
actgaggtggacgttgacgtggctgccgcacgggcggcgctggaggcgtcgggcgtccgt
cttaacgattcgcagtgggccgcgtgggaggcggccctcacgcgccgcctcgcactcatc
tgggggccaccggggacgggcaagagtcagacgttgcgggccgtcgtggccggggccgtg
tggctggcgcatcgggcaggcaagccgctccgtctcctcatcgccgccggtacgtacgcg
gccgtggacaacgtgctgctgggtgccgatcggctcctcgccgcgctcctgccggagaag
ccctaccggctcgtccgtatccagagctcgtacagcgagctgccggtcgagcaggctgag
gcacacccggatgtggagacactcaccgtgaagacgacgcgggcacccgaggaggtgctg
acgctgcaagggctgctagagcatcctgaggaaatcgtcgtcgtggccgggccgtcgcag
cagctgcacaacctcgccctggcgacgaagaacaagtcaaagccgcgagtgtcagctagg
ccggccctgacgcagcggcggtggttcgacctcgtgctgatcgatgaggcctcacagctc
gacgtggccgagagcacgctcgttgtaagcaaggcggccgacgaggcggccttcgtcctc
gccggcgacgacaagcaactcccgcccatccaccaggcgacgccgccacaggacctcgac
cacctcgtcgggagtgtctacgggtatgtgcgccatcaccacggtgtagcgccatgcccg
ctccaggtgaactaccgctcgtgccagacgctcgtcgcgttcacgaagcaggcggggtat
gatccgaggctgcacgcccaccaccgggatctgcgattggccctcctcacgagccgcttc
cccgaagagcgccccgaggactggccggcgatgctgcactggacgcccggctgggcggcc
ctgctcgccccctcgaagcccgccgcctgcttcatctacgaggacgaggtggcgagccag
gccaacgccttcgaggccgacgccgtggccgcgctgctccggctgttctacgggcgcgtg
gaccgccaactcgccggcgagctcgacgaggacgggcgggagaagcccctcaccggccgg
ccgcacgaccccgaaggattctggaaccgggccgtcggcgtggtgacgccgcaccgggcg
cagatggggaagatcgtagcgcggctgcaagccgccttccctgaccacgaccccggcctc
atctggggtgccgtggacacggtggagcgcttccaggggcaacagcgggacgtgatcgtg
gcctcgttcgggctcggcgacccggacctgatccgggcggaggacgagttcctctacagc
ctcaaccgcttcaacgtgatggcgtcgcgggcacgggccaagctcatcgtcttcaccacc
cgctcgctcgtggaccacctctcgaacgacgcggacgtgctggaagagtcgcggctgttg
aagaacttcgccgagtcgttctgcaaggacccgcagctattgacgctggggtatctggat
gagggtaggctcgtcgagcgggccggggtgttgaggacgcgctaa
DBGET
integrated database retrieval system
