Rhodocaloribacter litoris: GQ464_003740
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Entry
GQ464_003740 CDS
T09819
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
rlo
Rhodocaloribacter litoris
Pathway
rlo02020
Two-component system
rlo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GQ464_003740
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GQ464_003740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlo03021
]
GQ464_003740
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rlo02035
]
GQ464_003740
Transcription machinery [BR:
rlo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GQ464_003740
Bacterial motility proteins [BR:
rlo02035
]
Flagellar system
Flagellar assembly proteins
Stator
GQ464_003740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF2779
UPF0122
DUF2992
Clr5
Motif
Other DBs
NCBI-ProteinID:
QXD16071
LinkDB
All DBs
Position
890459..891220
Genome browser
AA seq
253 aa
AA seq
DB search
MAQDLQAHAVRYAREPNEANREAVVLAAIPLVRSVVGRLSIPDHPLATREDLENVGILGL
LQALEGYDPERGTPFVSYAYGRIRGALVDYLRSIDALPRERRRKLAEAHQALDTLRQVLG
AEPSDQDVADYLGISLVEYHTLLRDAQCRFSLSLHSPVDVDGEQIVLETIPNEDTFQAFE
QIDRASLREYIQTLIKELPEREQTILALYYFENLTLREIAGLMNRTEARISQILGKILMT
LRTQLTRAQSRAA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagacctacaagcccacgctgtacgatacgcgcgagagcccaacgaagccaac
cgcgaagccgtggtgcttgccgccatcccgctggtgcgctcggtggtcggccgcctcagc
attcccgaccatcccctggccacccgggaagacctggaaaacgtcggcatcctggggctg
ctgcaggccctggaaggctatgatcccgagcggggtacgccgttcgtctcctacgcctac
ggccgcatccgcggcgccctggtagactacctccgctccatcgatgccctgccccgggaa
cggcgccggaagctggccgaagcccaccaggccctcgacacgctccgccaggtcctcggc
gccgaacccagcgaccaggacgtggccgactacctgggcatctcgctcgtcgaataccac
accctgctgcgcgatgcgcagtgccgcttctcgctctcgctccattcccccgtcgacgtc
gacggcgaacagatcgtcctcgaaaccatcccgaacgaggacaccttccaggccttcgaa
cagatcgaccgtgcctcgctgcgggaatacatccagacgctgatcaaggaattgcccgag
cgggagcagaccatcctcgccctctactacttcgaaaacctcaccctgcgcgagatcgcc
gggctgatgaaccgcaccgaggcgcgcatctcccagatcctcggcaaaatcctgatgacg
ctgcgcacccagctcacccgcgcccagtcccgggcggcctga
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