Rhodocaloribacter litoris: GQ464_005670
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Entry
GQ464_005670 CDS
T09819
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
rlo
Rhodocaloribacter litoris
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Por_Secre_tail
FlgD_ig
Malt_amylase_C
Alpha-amylase_C_2
hDGE_amylase
CBM_20
Melibiase_C
SusG_C
Alpha-amylase_C
DUF5696
Motif
Other DBs
NCBI-ProteinID:
QXD16437
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Position
complement(1363914..1366943)
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AA seq
1009 aa
AA seq
DB search
MFRPSLRLVALLLGLLFAGPAAGQSIDVTFRYLDPGKTAVRAFVPGSFNGWGQPYTPGTS
SCIGTGHASAMTYDAGGGFWYHTVTLQAGQAYQYKIQVHHNEAGTSCTWLSDPLNPVTVG
PNNDSEVVIADPMVFQPAGEVNADGLMAAVSAGVFGSQALAQITFAAGGVERTDGLDFYD
PATGVFRFVLDVPVRAGSRFKITATDIAGRTVSAEIGELFSPIEWETEPFTTVKERFPVR
AFLTRLDGTVDPNLTEATLLVDGVERGVVEVTDGLVEVEVDLEMGENVFVLRAEIDGQVH
ESAPLVLTRRIHPLDAALATATVSGADRTFQIDLTPTALASAGLTATWQVDEQLSTTGLE
GPLNVSGDGLTATGTVAGPGELYVDVALSDPDAGEDALRMAVLVEADGTARAMRYEENAA
WIKNAVVYEIFPLMFGPEGSGTVTNPGNKFNEIRDELDYIAAMGFNAIWFMPIMHNQIMN
GLSGGYNIIDFYNVDPKLGTNDDFRALVERAHELGIRIILDLTPNHVSPAHPWVESLRKN
GAFSSFIQTTPSNHDRGLDGRGPNLPEIWHVEGGRNLYRKYDGFGDLANLNWDDDDLQAA
LLDVIAYWVRAFGIDGWRFDVYWGPWRRYGPERFGRPIRELMKRLRPDAWLLGEIAGTGF
GTEVYYADDDHGTPVVGGIDAGYDWNFYFNGIRGTYGVLSTYDALAHNGDFYPGPNARFF
RFLENHDEPRIAKLFAGAPDRILPLTGFLLTTTGVPMVYHGQEVGFGNVSGDERRAPVSW
ETPENGRFGRYYQRLIHARRQFAAFGTQELVTLNTTNSVYAYVRPYEDANAVVAINFFGT
PRTITLDPSQAVRMSHDGPVPYYDIFADTMAATTGAFTATIPPYETVVYITSEDPGFTVP
DLPPLPFGAVYVGTEAEAGPVPDAFRLEPAYPNPFARTTTIRYALPEPAPVRLEVYDVLG
RRVATLADGFRPAGTHAVRFDAGGLPSGTYLYRLQAGGRVATRTLVLVR
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcccttcccttcgtctcgtggctctgctgcttggcctgcttttcgccggcccg
gcggccgggcaatcgattgacgtcacgttccgctatctggaccccgggaagacggccgtc
cgggccttcgtgcccgggtcgttcaacggctgggggcagccgtacacgcccggcacgtcg
tcgtgcatcggcacggggcacgcctcggccatgacgtacgacgccggcgggggcttctgg
taccacacggtcacgctgcaggcggggcaggcctaccagtacaagatccaggtacatcac
aacgaggccggtaccagttgcacctggctctccgaccccctcaacccggtgacggtggga
ccgaacaacgattccgaagtggtcatcgccgacccgatggtgtttcagcccgccggggag
gtgaatgccgacggcctcatggccgccgtctccgccggggtgttcggctcgcaggcgctg
gcgcagatcaccttcgccgcgggcggcgtcgagcgcaccgacggcctcgacttctacgac
ccggctaccggcgtcttccgcttcgtgctcgacgtgcccgtgcgggccggctcgcggttc
aagatcaccgccaccgacatcgcggggcggaccgtctcggccgagatcggggagctgttc
tcccccatcgagtgggagacggagccgttcaccaccgtgaaggagcgctttcccgtccgt
gccttcctcacccgcctcgacggcacggtcgatccgaacctgaccgaggcgacgctcctg
gtggacggcgtcgagcggggcgtcgtggaggtgacggacggtctggttgaagtggaggtc
gatctggagatgggggagaacgtgttcgtgctccgggcggagatcgacgggcaggtgcac
gaatccgcaccgcttgtgctcacgcggcggatccacccgctcgacgccgccctggcgacg
gctaccgtctccggcgcggaccgtaccttccagatcgacctgacgccgacggccctcgcc
tcggccggcctgacggctacgtggcaggtcgacgagcaactcagcacaaccggcctcgaa
ggcccgctgaacgtctccggtgacggcctcaccgccaccggcaccgtcgccgggccgggc
gagctgtacgtggacgtcgcgctgagcgaccccgacgcgggcgaggacgcgctccgcatg
gccgtcctcgtcgaggccgacggcacggcgcgggccatgcgctacgaggagaatgcggcc
tggatcaaaaatgccgtcgtctacgagatcttcccgctgatgttcgggccggagggctcc
gggacggtgacgaacccgggcaacaagttcaacgagatccgcgacgaactcgactacatc
gccgcgatgggcttcaacgccatctggttcatgcccatcatgcacaaccagatcatgaac
ggtctctcgggcgggtacaacatcatcgacttctacaacgtcgatccgaagctcggcacg
aacgacgacttccgggcgctcgtcgagcgggcgcacgagctgggcatccgcatcatcctg
gacctgacgccgaaccacgtctcgccggcccatccctgggtggagagcctgcggaagaac
ggggccttctccagcttcatccagaccaccccgagcaaccacgaccgcggcctcgacggg
cgcgggcccaacctgcccgagatctggcacgtggagggcgggcgcaacctctaccgcaag
tacgacggcttcggtgacctggccaacctgaactgggacgacgacgacctgcaggccgcc
ctgctcgacgtcatcgcctactgggtgcgggcgttcggcatcgacggctggcgtttcgac
gtctactgggggccgtggcggcggtacggccccgagcgcttcggccggcccatccgcgag
ctgatgaagcgcctccgccccgacgcctggcttctgggcgagatcgccggcaccggcttc
ggcaccgaggtctactacgccgacgacgaccacggcacgcccgtcgtgggcggcatcgac
gccgggtacgactggaacttctacttcaacggcatccggggcacctacggcgtgctctcg
acctacgacgccctggcccacaacggcgacttctatccgggccccaacgcccgcttcttc
cgcttcctggagaaccacgacgagccgcgcatcgccaagctgttcgccggcgcccccgat
cgcatcctcccgctgacaggcttcctgctcaccaccaccggcgtgccgatggtctaccac
gggcaggaggtcggcttcggcaacgtcagcggggacgagcggcgtgcgccggtctcgtgg
gagacgcccgagaacggccgcttcgggcggtactaccagcggctcatccacgcccgccgg
cagtttgccgccttcggcacgcaggagctcgtcacgcttaacacgacgaacagcgtctac
gcctacgtccgcccctacgaggacgccaacgccgtcgtggcgatcaacttcttcggcacg
ccgcgcacgatcacgctcgacccctcgcaggccgtccgcatgagccacgacgggccggtg
ccgtactacgacatctttgccgacacgatggccgccaccacgggcgccttcacggcgacg
atcccgccctacgagacggtcgtctatatcacctcggaggaccccggcttcacggtgccg
gatttgccgccgctgcccttcggcgcggtgtacgtgggtaccgaggcggaagccggcccg
gtgccggatgccttccgcctcgagccggcctaccccaacccgtttgcccgcacgacgacg
atccggtacgcgctgcccgagcccgcgcccgtgcgcctggaggtctacgacgtgctcggc
cgccgcgtggccaccctggccgacggtttccgtcccgccggcacccacgccgtccgcttc
gacgccgggggcctgcccagcgggacctacctctaccgcctccaggccggcggccgcgtc
gccacacgcacgctggtgctggtgcgttga
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