Rhodocaloribacter litoris: GQ464_006770
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Entry
GQ464_006770 CDS
T09819
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
rlo
Rhodocaloribacter litoris
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlo03032
]
GQ464_006770
03036 Chromosome and associated proteins [BR:
rlo03036
]
GQ464_006770
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_006770
DNA replication proteins [BR:
rlo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GQ464_006770
Chromosome and associated proteins [BR:
rlo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GQ464_006770
DNA repair and recombination proteins [BR:
rlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GQ464_006770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QXD17178
LinkDB
All DBs
Position
1655758..1656072
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AA seq
104 aa
AA seq
DB search
MTVTKSDIIDRVATGTGLTKIETEAVINGFIAVVKAALRQGERVDLRGFGAFKVQHRAAR
TARNPRTREEIEVPPQYVPVFKASRELRQDVDEAMKTGKSEKPA
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atcaccgtgacgaaaagcgacatcatcgaccgcgtggcgaccggaaccggtctgaccaaa
atcgagacggaggccgtcatcaacggcttcattgccgtcgtcaaagccgccctgcgacag
ggagagcgcgtcgacctccgggggttcggcgcgttcaaagtgcagcaccgggccgcccgg
acggcacgcaatccgcgcacgcgcgaagagatcgaagtgccaccacagtacgttccggtc
ttcaaggcatcccgggagctccgacaggacgtcgacgaggccatgaagacgggcaagagc
gaaaaacctgcgtga
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