Rhodocaloribacter litoris: GQ464_007110
Help
Entry
GQ464_007110 CDS
T09819
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
rlo
Rhodocaloribacter litoris
Motif
Pfam:
FlgD_ig
Dockerin_1
Por_Secre_tail
Big_2
Motif
Other DBs
NCBI-ProteinID:
QXD16700
LinkDB
All DBs
Position
complement(1737150..1742267)
Genome browser
AA seq
1705 aa
AA seq
DB search
MSTLQRLPAALLAVFAFLLVGAGGARAQVTVSGGEGTINGTYTTVDAAITAINGVGSNGA
QSIVVAINPGSFTITQALTNKEDNITFVAESGSVTLNSLNLNAGTVNFGDGTDASTFVLN
SLGLTIESPSAMAVTVAAQASVTIGSGSIFSNGVTLTVNDGGTLSLAANLTVNGTLAVDP
DGGDSGTTPAVVDLGGNTLTVANGATLTNDGLIQNGTVATASGSTATSSTFNGSGTFPNL
TIGSNHTAAFGATTPTVSGSLTVTGVLSGTGTVTLSGANTTHTVSGDVDPSLQISASGVT
INGDTGSSVASELGNVTVASNASATIQSVKTIAGDVTVASQASLQASLGGSSPTITGNVT
VNQNASLSLGNATVSGNVTVNAISLQPSSMLLTGNVTVNGTFTVVDFATLDIGTHTLTLG
DDITVATNAAVAGTGTFKLTGSTAGHNFNGKSIANLSVAAAATINSNVTVTGSLTVDDGD
TTSGEGLFTIAGGNTVTASGTVTLKDDFAAATGTLKVGGTMVQAPFDSNAGFTTVQLPAV
TIDAAAGVMLTSSGPSSGTFQVQGTFTHTQGEVSLGSNHLEFQGNYTYTAGSYVANGGNV
IWNSAGTFSTGGGTVSFPNLTVSQALTAGNDDSIEIRNTLVANAAISVDGDSDDSGDVII
LDGASVTYGVDQALGTDADDVVLGSDLNVTYTGAATTNVELPASVATLTAQAALTVDQNV
TVNSKLTADGAAISVSNGGATVTLTVASGGTIERANNGSFSETSDDKIAVTDYHLVYSDD
VGTAYVAGGELKTSANILSLTVKDTNTGVAGTPTLDLPDANVTVGDLILDNGEVYITTTS
ASRTLTVTGNATVIGVGNVEAGAGNPGTLAFAGSSAQTFTVPSAGMTFASGSPDPVHLQV
NNAAGVMVSGGNLTINDNDVNTIILTKGLLQTGSTNWIAPAFDSATDAALVDVSSGKGAI
RGNVRLPLEDAGSEDTNAEAYVLTFGALGTYDADADVAHLRPAVFTFQNDETLQASGVQH
LFAGYFDGDPAGSNGFPLMDGSLVINRYPSFYWLVRSSGTLPSNVVYDLRFEAEGYNEFV
AEDVNNTRLIRRFDGSTANPWALITGTAGYNNFNASPSNDHPVVRVGGVSGAVETTTQRF
TFGLETNLVAEQPDAVELNAGMTANVTLTPDVFMGGSPFLTPPPSYTYVVSTSNADAATA
TTSGDTLVVTAVAAGAATITITATDRLGVSTSTTLDVTVNADLVAQGTIANRGVNLNQTV
QVAPLGTYFTGGKAPYAFSAASNDTTVATVAVSNDTLTVTGVGTGTAEVTVTATDALGDT
ATQAFSVTVNTGLVAVDSLGTITLIVGEDSTATLSGLFAGGTPPVTFAAASSDEAVATAA
VSGDTLTVTAVAAGMATITVTATDSLGVQAGFSFEVAVGLSQGDVNGDASFDVADVVLVL
QAIVGQVTLTDVQQAAADFNGDGEVDVADVVLMLQALAGGSGKTTAVRLSDVAGEAAWGE
VTFENGVAIVPVALKAAQNVHGIELEIPVPQEVEFEAIQASLPEGWMVAHHFDAEARVLR
VAMAGLQPAADEVVRLHFRAQGDVKTVNGLQGTVRLNAKTTAELAPVALVEVPEVYALET
SYPNPFRSHTNIKYQLPEEVHVRLVVYDIQGREVARLVDSAQKPGYHTVIWDGRTDAGTP
AASGLYLYRLEAGSFSAVRKMMLVR
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttgcaacgactgccggcggccttactggccgtctttgcctttctgctcgtc
ggtgccggaggcgcccgggcacaggtaaccgtttccgggggtgaagggaccatcaatggt
acctataccaccgttgatgcggccatcacggcgatcaacggggtggggagcaatggggca
cagtccattgtggttgccatcaaccccggttcgtttacgattacccaggcgttgaccaac
aaggaggataacatcacgttcgttgccgaaagcggtagtgtaacgctgaacagcctgaac
ctgaacgcggggacggttaacttcggcgatggtacggacgcctcgacgtttgtgctgaac
agcctggggttgacgatcgagtcgccgagtgccatggcggttacggtggcggcccaggcc
tcggtgaccatcggcagcggtagcatctttagcaatggtgttacgctcacggttaatgac
ggtggtacgctctcgcttgcggccaacctgaccgtgaatggtacgctggctgtcgatccc
gacggtggcgactccggtaccacgcccgccgttgtggacctcggcggcaacacgctcacc
gtggccaacggcgcgacgctgacgaacgatggtctgatccagaacggcacggtggccaca
gccagtggcagcacggcgaccagctcgaccttcaacggcagcgggaccttcccgaatctt
accattggttccaaccatacggcagcctttggtgccaccacgcccacggttagcggtagc
ctcaccgttaccggtgtgctgagtggtaccggtacggtgacgctgagcggtgccaacacg
acccacacggtgtcgggcgatgtggatccctcgctgcagatctcggccagcggtgtgacg
atcaacggggacacgggcagcagcgtggcctcggagctgggcaatgtgacggttgcctcg
aacgcgagtgcgaccatccagagtgtcaagaccattgccggggatgtgacggttgcctcg
caggccagccttcaggcttcgctgggcggcagcagccctacgatcaccggaaacgttacg
gtgaaccagaatgccagcctgagcctgggcaatgccacggtcagtggcaatgtaacggtg
aacgccatcagccttcagcccagctccatgctgctgaccggcaatgtgacggtgaatgga
acctttaccgtagtagactttgccacgctggatatcggcacccatacgctcacgctcgga
gatgatattacggtggcgaccaatgctgccgtagcgggcaccggtaccttcaagctgacg
ggcagcaccgccggtcataacttcaacggcaagtcgattgccaacctgtcggtcgcagct
gcggcgacgatcaacagcaacgtgacggtgacgggttcgttgacggtggatgatggtgac
accacctcgggtgaggggctgtttaccattgcaggtggtaacaccgtgacggcctccggc
acggtgaccctgaaggatgacttcgccgccgcgaccggtacgctgaaggtgggaggcacg
atggtccaggcccccttcgactcgaatgccggcttcacgaccgtgcagctcccggcggtg
accatcgacgcggccgccggggtcatgctcacctccagtggaccgagctccggtacgttc
caggtgcaggggacctttacccacacgcagggcgaggtttccctcggcagcaaccatctg
gagttccagggtaattacacctatacggccggctcctatgtggccaatggcgggaacgtc
atctggaacagcgccggcaccttcagcacgggcggcggcacggtgtccttcccgaacctg
acggtcagccaggcgctcacggccggtaacgacgacagcatcgagatccggaacaccctc
gtcgccaatgccgccatctcggtggatggtgacagcgatgacagcggcgacgtgatcatc
ctcgacggggcttccgtcacctatggcgtcgaccaggccctgggcaccgatgccgacgac
gtggtgctggggagtgacctgaatgtgacctacacgggcgcggcgactacgaatgtcgag
cttccggcttccgtggccacgctcaccgcgcaggccgctctgacggttgatcagaatgtc
accgtcaacagcaaattgacggccgacggtgccgcgatttctgtgagcaacggcggtgct
acggtcacgttgacggtggcctcgggcggtacgattgaacgtgccaataatggctcgttt
agcgagacgtccgacgacaaaatcgccgtcaccgactatcacctggtgtattcggatgat
gtgggtacggcctatgttgccggtggggagttgaaaacgtcggcaaacatcctctcgctg
acggtgaaagacacgaacaccggtgtggccggtacccccacgcttgatctcccggatgcc
aatgtcacggtcggggacctgatcctggataatggtgaggtttacatcaccaccacgtcg
gccagccggacgctgacggttaccgggaatgccacggtcatcggcgtaggcaacgtggaa
gccggggccggtaatccggggacgctggcgtttgccggctcgtcggcgcagaccttcacg
gtgccgtccgccgggatgacgtttgcttccggcagcccggatccggttcacctgcaggtc
aacaacgcggccggcgtcatggtctcggggggcaacctgaccatcaacgacaacgacgtc
aacacgatcatcctgaccaaggggctgctccagacgggtagcaccaactggatcgcgccg
gcgtttgacagcgccaccgatgcggccctggtggacgtctcctcgggcaagggggccatc
cggggcaacgtgcgcctgcctctggaggatgccggtagtgaagacaccaacgcggaagct
tatgtgctgacgttcggtgcgctgggcacctacgatgccgatgccgacgtggcccacctg
cggccggccgtgttcaccttccagaacgacgagacgctgcaggccagcggcgtgcagcac
ctgttcgccggctacttcgacggcgacccggccggcagcaacggcttcccgctgatggat
ggcagcctcgtcatcaaccgctacccgagcttctactggctggtgcggagcagcgggacg
ctgccgagcaacgtggtgtacgacctgcggtttgaagcggagggctacaacgagttcgtg
gccgaagacgtcaacaacacgcgcctgatccgccgcttcgacggttcgacggcgaacccg
tgggccctgatcaccggtacggccgggtataacaacttcaacgccagcccgtcgaacgat
catccggtggtccgtgtcggaggcgtctccggggccgtggagaccacgacccagcgcttc
acctttggtctggagaccaacctggtggccgagcagccggatgccgtggaactcaacgcc
ggcatgacggcgaacgtcacgctgacgccggacgtcttcatgggcgggtcgcccttcctg
acgcctccgccgagctacacctatgtggtgagcacgtcgaacgcggacgcggcgacggcg
accacgagtggcgacacgctcgtcgtgacggccgtggcggccggtgcggccacgatcacg
atcacggccaccgaccgcctgggggtgagcacgagcacgacgctcgatgtcaccgtcaac
gcggacctggtggcgcagggtacgattgccaaccggggtgtcaacctgaaccagacggtc
caggtcgccccgctgggaacgtacttcaccggtggtaaggcgccctacgccttctcggcg
gcctcgaacgacacgacggtagccaccgtggcggtcagcaacgatacgctgacggtcacg
ggcgtcggcaccggtacggccgaagtgacggtgacggccaccgacgccctgggcgacacg
gccacgcaggccttctcggtcacggtcaacaccgggctcgtcgccgtcgactcgctcggt
acgatcaccctgatcgtgggcgaggatagcacggccacgctgagcggtctcttcgccggc
ggcacgccgccggtcaccttcgccgccgccagcagcgacgaggccgttgccacggctgcg
gtcagcggggacaccctgacggtgacggccgtggcggccggcatggccacgatcacggtg
acggccaccgactcgctcggtgtgcaggccggcttcagcttcgaagtggccgtggggctg
tcccagggtgacgtcaacggcgacgcctcgttcgacgtggccgatgtggtgctggtgctg
caggccatcgtcggccaggtgacgctcacggatgtgcagcaggctgcggccgacttcaac
ggcgacggcgaggtcgatgtggccgacgtggtgctgatgctgcaggcgctcgccggcggc
tccggcaagacgacggccgtgcgtctgagcgacgtggccggtgaggccgcctggggtgaa
gtcacgttcgaaaacggcgtggcgatcgtcccggtggcgctgaaagccgcccagaacgtg
cacggcatcgagctggagatccccgtgccgcaggaagtggagttcgaggcgatccaggcc
tcgctgcctgaaggctggatggtggcccaccacttcgacgccgaagcacgggtgctgcgt
gtggcgatggcggggctgcagccggccgccgatgaggtcgtccgcctgcacttccgtgca
cagggcgatgtgaagacggtcaacgggctgcagggcacggtgcgcctcaacgccaagacg
acggccgagctggctccggtggcactcgtcgaagtgcccgaggtctatgccctggagacc
agctatccgaacccgttccggagccatacgaacatcaagtaccagcttccggaagaggtc
cacgtccgcctggtggtctatgacatccagggacgtgaggtcgcacggctcgtggattcg
gcccagaagcctggttaccacacggtgatctgggatgggcggaccgatgccggcacgccg
gctgcctccggtctctacctctatcgcctggaggccggcagcttctcggctgtgcgcaag
atgatgttggtccgataa
DBGET
integrated database retrieval system
