Rhodocaloribacter litoris: GQ464_007135
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Entry
GQ464_007135 CDS
T09819
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rlo
Rhodocaloribacter litoris
Pathway
rlo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GQ464_007135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlo03021
]
GQ464_007135
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_007135
Enzymes [BR:
rlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GQ464_007135
Transcription machinery [BR:
rlo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GQ464_007135
DNA repair and recombination proteins [BR:
rlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GQ464_007135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
QXD16705
LinkDB
All DBs
Position
complement(1748233..1749216)
Genome browser
AA seq
327 aa
AA seq
DB search
MSTFAIQMPEGVEVEEITETYGRFVIQPLERGFGVTIGNALRRVLLSSLPGVAITAVKID
GVQHEFSTIPGVTEDVADVILNLKGVRFKANENAEGVIHLTLNGPGAWTAADIGKATSDY
EVLNPDHHIATLADDAHLSVELRLGRGRGYVPADENKRADDPIGVIAVDAIFTPIENVRY
TVKQTRVGQKIDFERLTMEIDTDGSIAPDEALAQAATILRDHVNLFIKMDSEPQPTPEEK
EVDAEVQRIRELLAQSVDELDLSVRAHNCLKTANIKTIGDLVRREESEMLKFRNFGRKSL
QELIQVLEERNLHFGMDVDKYLEEVRS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtttgcgattcaaatgccggaaggcgttgaagtagaagagatcaccgagacc
tacgggcgctttgtgattcaaccgctggaacggggattcggcgtgaccatcgggaacgcc
ctgcggcgtgtgctgctgtcctccctgccgggggtggccatcacggccgtcaagatcgac
ggggtgcagcatgagttctccacgatcccgggcgtgaccgaggacgtggccgacgtgatc
ctgaacctcaaaggggtacgcttcaaggcgaacgaaaacgccgaaggcgtcatccacctg
acgctcaacggcccgggggcctggacggccgccgacatcggcaaggccacgagcgactac
gaggtgctcaaccccgaccaccacatcgccacgctggccgacgatgcccacctgagcgtc
gaactgcggctcgggcgcgggcgcggctacgtccccgccgacgagaacaaacgcgccgac
gaccccatcggggtcatcgccgtcgatgccatcttcacgccgatcgaaaacgtccggtac
accgtcaagcagacgcgcgtgggacagaagatcgacttcgaacggctcacgatggagatc
gataccgacggctccatcgccccggacgaggccctggcacaggccgccaccatcttgcgg
gaccacgtcaacctgttcatcaagatggacagcgagccccagccgacccccgaggagaag
gaggtcgacgccgaggtgcagcgtatccgcgagttgctggcccagtcggtcgacgaactc
gacctctcggtgcgggcccacaactgcctcaagacggccaacatcaagacgatcggcgac
ctcgtccgccgcgaagagtccgagatgctgaagttccgcaacttcggccggaagtccctc
caggagctgatccaggtgctcgaagaacgcaacctgcacttcggcatggacgtggacaag
tacctcgaagaagttcgcagctag
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