Rhodocaloribacter litoris: GQ464_008805
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Entry
GQ464_008805 CDS
T09819
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rlo
Rhodocaloribacter litoris
Pathway
rlo03030
DNA replication
rlo03430
Mismatch repair
rlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GQ464_008805 (holA)
03430 Mismatch repair
GQ464_008805 (holA)
03440 Homologous recombination
GQ464_008805 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlo03032
]
GQ464_008805 (holA)
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_008805 (holA)
Enzymes [BR:
rlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GQ464_008805 (holA)
DNA replication proteins [BR:
rlo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GQ464_008805 (holA)
DNA repair and recombination proteins [BR:
rlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GQ464_008805 (holA)
BRITE hierarchy
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QXD17016
LinkDB
All DBs
Position
2127255..2128271
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AA seq
338 aa
AA seq
DB search
MAQAGLTYETLETAFRHGNFKPLYFFFGEERFLIDSLQALLIEKALAPHERDFNLDIIYG
AEANAVDVLARCAGYPVMAPRRVVIVRDFEKLPDNLRFKAYAEHPNPTAVVLLICGNKPN
LAAHPYRALREHAAWAEFKPLYERQMPGWIEQRVREKGYRIDAKAAERLAAYVGTDLRSA
DAEIDKLITYAGGRETLTADDVVAAGGQTREYNVFELQRAVGAGHYPEALAITERLLQQA
SNARGEGLMIVSVLTGYFMKLWKLTDCQARGMTDRAMASRIGVSPYFIKEYLMSLRRYPP
AALEAAFATLLAADYELKGGGSRNEHLVLDLMLRRLVH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggccggactgacatacgaaacgctggagaccgccttccggcacggcaacttc
aaaccgctgtacttcttctttggcgaggaacgatttctgatcgattcgcttcaggcgctt
ttgatcgagaaggccctggcaccgcacgagcgtgacttcaacctggacatcatctacggc
gccgaagcgaacgcggtggacgtgctggcccggtgtgcggggtatccggtgatggccccg
cgccgcgtggtgatcgtacgggacttcgaaaagctcccggacaacctgcgcttcaaagcg
tatgcggagcaccccaaccccacggcggtggtgctgctgatctgcggcaacaaaccgaac
ctcgcagcccatccctaccgcgccctgcgcgagcacgccgcctgggccgagttcaaaccg
ctctacgagcgtcagatgcccggctggatcgagcagcgggttcgagaaaagggttaccgc
atcgacgcgaaggccgccgagcggctggccgcgtatgtgggcaccgacctgcgcagcgcc
gacgctgaaatcgacaaactgatcacctacgcgggcgggcgcgagacgctcacggcagac
gacgtcgtggccgccggcgggcagacacgggaatataacgtcttcgaactgcagcgggcc
gtcggcgccgggcactaccccgaggccctggcgattacggaacgattgttgcaacaagca
tctaatgcgcgaggggaaggcctcatgatcgtgtccgtgctgacgggctacttcatgaag
ctctggaaactgacagattgccaggcccggggaatgacggaccgggctatggcgtctaga
ataggggtttccccttacttcataaaagagtaccttatgagcctgaggcgctatcccccc
gccgccctcgaggcagccttcgccaccctgctggcggcggactacgagctcaagggaggc
ggcagccgcaacgagcacctggtgctggacctgatgctccggcggctcgtccactga
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