Rhodocaloribacter litoris: GQ464_011330
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Entry
GQ464_011330 CDS
T09819
Name
(GenBank) hypothetical protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rlo
Rhodocaloribacter litoris
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rlo03009
]
GQ464_011330
Enzymes [BR:
rlo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GQ464_011330
Ribosome biogenesis [BR:
rlo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GQ464_011330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_11
Methyltransf_31
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QXD14050
LinkDB
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Position
2726152..2727222
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AA seq
356 aa
AA seq
DB search
MTAAESAAQKTGWLRERLAPWADRLAPLEAVPEPQRWGYRENVCLSTAWVDGVWHFGLRR
RDELIPIPDCPVHAPRVRAVVRSLARVLPPGPSFPMVYLVQSRAQVVLVVKARAVEAADA
LGSVLGEALAGAGVEGVWLHLNPSAGRRVFARRAWRLLWGVPRSRDADGLLYGPAAFSQL
LPVLHRRALDAAEAFLAPAPGTAVVDLYCGTGASLVRWLRAGAAAAGVELGGEAVACARE
NAPDALILRGACAQRLPQLTAWAEGHTGPRRLYANPPRTGLEPEVLRWIAGVYRPGRLAY
LSCSAGTLRRDLDALTGAGYRVARLVPYDFFPQTYHVEVLALLEDVSPSRSPTYSA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggcggagagcgcggcgcagaagaccggctggctccgcgagcgcctggcgccg
tgggcggatcggctcgccccgctggaggccgtgccggagccacagcggtggggctaccgc
gagaacgtgtgcctgtccaccgcctgggtggatggcgtgtggcacttcggcctccggcgc
cgggatgagctgatccccatcccggactgccccgtgcacgcgccgcgcgtccgggcggtg
gtgcggagcctggcgcgcgtcctgccgccggggccgtccttccccatggtgtacctggtg
cagtcgcgagcgcaggtggtgctggtggtcaaggcgcgtgcggtggaggcggcggacgcg
ctggggtcggtgctgggggaggcgctggcgggcgcgggcgtcgagggggtgtggctgcac
ctgaacccctcggcggggcggcgcgtcttcgccaggcgggcatggcggctgctctggggc
gtcccccgctcgcgcgacgccgacgggctcctctacggcccggcggccttcagccagctc
ctgcccgtgctgcaccgccgcgccctcgacgccgccgaggcgttcctcgcgccggccccc
ggcacggcggtcgtagacctctactgcggcacgggcgccagcctggtgcggtggctgcgg
gccggggccgccgcggccggcgtcgagctgggtggtgaggcggtggcctgtgcccgcgag
aacgccccggacgccctgatcctgcgcggggcctgcgcccagcgcctgccgcagctcacc
gcctgggccgagggccacaccggcccccggcggctctacgccaacccgccccgcacgggc
ctcgagcccgaggtgctccggtggatcgccggcgtctaccggcccggccgcctggcctac
ctctcgtgcagcgccggcaccctccgccgcgacctcgacgccctcaccggcgccggctac
cgcgtcgcccgcctcgtcccctacgacttcttcccgcagacctaccacgtagaggtgctg
gcgctgctcgaagatgtgtctccttctcgctcacccacttactccgcgtaa
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