Rhodocaloribacter litoris: GQ464_013820
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Entry
GQ464_013820 CDS
T09819
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rlo
Rhodocaloribacter litoris
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_013820
Enzymes [BR:
rlo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GQ464_013820
DNA repair and recombination proteins [BR:
rlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GQ464_013820
Prokaryotic type
GQ464_013820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXD14500
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All DBs
Position
complement(3334493..3335917)
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AA seq
474 aa
AA seq
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MTIVWFHDDLRLCDHPALTQAAADGPVLPVFIWSPEEHGAWPPGAARRWWLHHSLRRLDE
ALRGKGLRLILRRGPAAETLRALLDETGATAVYWTARYEPALRRRDERLAKSLKREGITV
ARFGGRLLHDPDAVRTNAGDPYRVFTPFWKKMKATVEVSAPLPVPDLTPDHTPATWPETL
PVDALGLLPEIDWAGGLREAWTPGEDGARARLEAFLDDTLAAYPEGRDRPDRPGTSRLSP
HLAHGEISPRQVWHAVRNRIAETGEQDAGEAFLRELGWREFGYHLLHHFPHTTDRPLQEK
FDAFPWRDDDDALHRWQRGRTGFPIVDAGMRQLWHTGWMHNRVRMIVASFLTKDLLIPWQ
EGARWFWDTLVDADLANNTLGWQWSAGSGADAQPFFRIFNPVAQGRRHDPDGAYVRRWVP
ELKDVQDRALHAPWEAGAAVLAKAGVRLGETYPAPMVNHAEARQRALDAYERVK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgtctggttccacgacgatctccgcctttgcgaccacccggctctgacgcag
gcggccgcggacggacccgttctcccggtgtttatctggtcgcccgaagagcacggcgcg
tggccgccgggggccgcccgccggtggtggctccatcacagcctgcggcgcctggacgaa
gctctgcgcggaaagggcctgcgcctgatcctccgccgcggtcccgccgccgagaccctg
cgcgccctgctcgacgagaccggcgccacggccgtctactggacggcccgctacgaacca
gccctccgccggcgcgacgagcgcctggcgaaaagcctcaaacgggaaggcatcacggtg
gcgcgcttcggcgggcggctcctgcacgacccggatgccgtccgcacgaacgccggcgat
ccctaccgggtcttcacgccgttctggaagaagatgaaggccaccgtggaggtctccgcc
cccctgccggtcccggacctcacccccgaccacacccctgccacgtggcccgagacgctc
ccggtcgacgccctgggcctcctgcccgagatcgactgggccggcgggctgcgcgaagcc
tggacgccgggtgaggacggcgcccgcgcccgcctcgaggccttcctcgacgacaccctg
gcggcctaccccgaaggccgcgaccggccggaccgccccggcacatcgcgcctctcaccc
cacctggcccacggcgagatcagcccccggcaggtgtggcacgccgtccggaaccggatt
gcggagaccggcgagcaggacgccggcgaagcgttcctccgcgagctgggctggcgcgag
ttcggataccacctcctccaccacttcccccacacgaccgaccggccccttcaggagaag
ttcgacgccttcccctggcgcgacgacgacgacgccctgcaccgctggcagcggggccgg
acgggcttccccatcgtggatgccgggatgcgacagctctggcacacgggatggatgcac
aaccgcgtgcggatgatcgtggcctcgtttctgacgaaagacctgctcatcccctggcag
gagggcgctcgctggttctgggacacgctggtcgatgccgacctggccaacaacaccctc
gggtggcaatggtccgccggctcgggcgcggacgcccagcccttcttccgcatcttcaac
cccgtcgcgcagggccgccgtcacgatcccgacggagcctacgtccgccggtgggtgccg
gaactgaaggacgtgcaggacagggccctccacgccccctgggaagccggggcggcggtg
ctggcgaaggcgggcgtccggctcggggagacgtacccggcgccgatggtgaaccacgcc
gaggcccggcagcgggcgctcgacgcttacgaacgcgtcaaatga
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