Rhodocaloribacter litoris: GQ464_014365
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Entry
GQ464_014365 CDS
T09819
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rlo
Rhodocaloribacter litoris
Pathway
rlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GQ464_014365 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_014365 (priA)
Enzymes [BR:
rlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GQ464_014365 (priA)
DNA repair and recombination proteins [BR:
rlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GQ464_014365 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Helicase_C
Zn_ribbon_PriA
ResIII
PriA_C
AAA_16
Zn_ribbon_6
AAA_30
Zn_Ribbon_YjdM
PIF1
AAA_19
AbiEi_4
PyrI_C
Motif
Other DBs
NCBI-ProteinID:
QXD14602
LinkDB
All DBs
Position
3473530..3476013
Genome browser
AA seq
827 aa
AA seq
DB search
MPAAVRVVVPLPVDQTYTYLVPDDLQEEARVGCRVLVPFGPRRLTGMIVGAAEPAVEGVT
LRPILDVLDETPSFTGEMLRLTRWIADYYVCGWGEVIKAALPSGIEVESRWVLVRTAASC
DGWTGPPAARAVLRYLEVHGGEASLDALRQAGLDARLALARRLERDGLVRVEARLARPKV
RVRREKHVRFAPAFRTPAARADLGALLRGAKQVAVVEALEALVRAGKREPRRAEVLARAG
ASAATLNGLVKKGILEVVEREVIRSPLDAPAPEEVPPPAYTLHPSQQTALDRIHEAVAAG
RFETFLLHGVTGSGKTEVYIAALKAVVARGKTGIILVPEIALTPQTVRRFRAHFGDRIAV
LHSRMSPGERYDAWRHLRSGRFSIVIGPRSAVLAPVSNLGLIVVDEEHEPSYKQFDPAPR
YHARDVAVMRAYMNDAVCVLGSATPAVESYMNARWGKYTLLSMPERVPVPGHAAAPLPVV
HIVDLALEHKKHRLDGVLSEPLRRAIRTRLDRNEQVILLQNRRGYAPVIACRSCGWAPMC
PDCSVSMTYHKDKRLLRCHYCGRTRRLPPRCPKCEAEDLARLGAGTQRVEEELAACFPEA
RILRMDLDTTGRKNAHHELLERFRKGKAEVLLGTQMVAKGLDFPRVTLVGVVDADVGMLL
PDFRAEERTFQLLTQVAGRAGRAGLRGEVILQTRNPDRPVLRYAVAHDYEGFVAAILPER
ELLGYPPFGRIVGVEFRGPQEAEVRQYAGRWTAALRGQVGEALDVLGPEAAFIGRVKRQY
RFHTIIKVPRGFKTETLQRVLRHTGIRAGAPPGGSRVAIDVDAVGLF
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgccgtccgtgtcgtcgttccgctgcccgtcgatcagacgtacacctatctg
gtgccggacgatctgcaggaggaggcgcgggtcgggtgccgggtgctggtaccgttcggg
ccgcgccggctcacggggatgatcgtcggggcggcggagcccgcggtggagggggtcacc
ctccggccgatcctggacgtgctcgacgagacgccgtccttcaccggggagatgctccgg
ctcacccgctggatcgccgactactacgtctgcgggtggggtgaggtgatcaaggcggcg
ttgccctcgggcatcgaggtcgagagccggtgggtgctggtgcgcacggcggcgtcctgc
gacgggtggacgggacccccggcggcccgggccgtgctgcgttatctcgaggtgcacggc
ggcgaggcctcgctcgatgcactccggcaggcaggtctggatgccaggctggccctggcc
cgccggctcgagcgcgacggcctggtgcgggtcgaggcccggctggcccggccgaaggtg
cgggttcgccgggaaaaacatgtgcgctttgctccggccttccgcacaccggcggcccgg
gcggatctcggagcgttgctccggggggcgaagcaggtggctgtcgtggaggcgctggag
gcgctggtgcgggcggggaagcgggagccgcgcagggccgaggtgcttgcccgggcgggg
gcttcggccgccaccctcaacgggctcgtcaagaaaggtatcctggaggtcgtcgagcgg
gaggtcatccgctcgcccctcgacgcgcctgcgccggaggaggtgccgccgcccgcctac
acactgcacccgtctcagcagacggccctcgaccggatccacgaggccgtcgcggccggg
cgtttcgagacgttcctgctgcacggcgtcaccggcagcggcaagaccgaggtgtacatc
gccgccctgaaggcggtggtggcccgtggcaagaccggcatcatcctcgtgcccgagatc
gccctcacgccgcagaccgtccggcgctttcgcgcccacttcggggatcgcatcgccgtc
ctgcattcgcgcatgagcccgggggagcgctacgatgcctggcggcacctgcgctcggga
cggttctccatcgtcatcgggccccgctcggcggtgctggcgcccgtctccaacctgggg
ctcatcgtcgtcgatgaggagcacgagccctcctacaagcagttcgatcccgccccgcgt
taccacgcccgcgacgtggcggtgatgcgggcgtacatgaacgacgccgtgtgtgtgctt
ggctcggccacccccgctgtcgagagctacatgaacgcacgctggggcaagtacacgctg
ctctcgatgccggagcgggtgccggtgcccggccacgccgccgccccgctgcccgtcgtc
cacatcgtggacctggcgctcgagcacaagaagcaccggctcgacggcgtgctctccgag
ccgctgcgccgggccatccgcacccgcctcgaccgcaacgagcaggtcatcctcctgcag
aaccgccgcggctatgccccggtcatcgcgtgccggtcgtgcgggtgggcgccgatgtgc
ccggactgctccgtctcgatgacgtaccacaaggacaagcggctcctccgctgtcactat
tgcggccgcacgcggcggctcccgccgcggtgtcccaagtgcgaggcggaggacctggcc
cgtctcggcgccgggacgcaacgcgtcgaagaggagctggccgcctgcttcccggaggcc
cgcatcctgcggatggacctcgacaccaccggccgcaagaacgcccaccacgaactgctc
gaacgtttccgcaaaggcaaggcagaggtcctcctcggcacccagatggtcgccaaaggg
ctcgacttcccccgggtcaccctcgtcggggtcgtcgatgccgacgtcggcatgctgctg
ccggatttccgggccgaggagcgcacgtttcagctgctgacgcaggtggccggccgggcc
ggccgggccggcctccggggggaggtcatcctccagacccgcaatccggaccggcccgtg
ctgcgctacgccgtcgcacacgactacgaggggttcgtcgccgcgatcctgcccgagcgg
gaattgctcggctatcccccgttcggccgcatcgtcggcgtcgagtttcgcgggccgcag
gaggcggaggtgaggcagtatgccgggcggtggacggccgcgctgcgcggccaggtcggc
gaggcgctcgacgtgctcggtcccgaggcggccttcatcgggcgcgtcaaacggcagtat
cgcttccacaccatcatcaaggtgccgcgcggcttcaagacggagacgctgcagcgggtc
ctgcgccacaccggcatacgggccggcgcgccgcccgggggcagccgcgtcgccatcgac
gtcgatgccgtcgggttgttctga
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