Rhodocaloribacter litoris: GQ464_014595
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Entry
GQ464_014595 CDS
T09819
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rlo
Rhodocaloribacter litoris
Pathway
rlo03030
DNA replication
rlo03430
Mismatch repair
rlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GQ464_014595
03430 Mismatch repair
GQ464_014595
03440 Homologous recombination
GQ464_014595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlo03032
]
GQ464_014595
03400 DNA repair and recombination proteins [BR:
rlo03400
]
GQ464_014595
Enzymes [BR:
rlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GQ464_014595
DNA replication proteins [BR:
rlo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GQ464_014595
DNA repair and recombination proteins [BR:
rlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GQ464_014595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
DUF7508
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
QXD14644
LinkDB
All DBs
Position
3533772..3535481
Genome browser
AA seq
569 aa
AA seq
DB search
MRLAEIPFVVTDVETTGIDPGRHRVIEIAAVKVVGGVVVDRFTRLVNPGRAVPRRITALT
GISTAMLYGEPPPGEVLPGYLDFLGDGVFVAHNLPFDRGFLDAELARLGRPALTNPGLCT
LRLARRLLRGLRSKSLGSIAAFYGLSPNGRHRALGDAELTAQVLLRLLSQLGFQAGLETL
DELLAFQNKTYVHLEAGPGHLQRLREEVVPRLPRRPGVYFMKDGQGTILYIGKAKSLRDR
VRSYFTGIESHAEHIRQMVAGVRDVAWEETGSELAALLLESKLIKAHRPRFNRAQRRYRN
RPFIRLDVTEPFPRVRWQAFLADDGAEYFGPLGGRREAEQVVELIQRYYRLRECDDDTFA
RGHRCLYAAMGRCDGPCEGGDAAGAYAAEVQRVRDFLTGRDRTVLERLEADMRAAAANLD
FEQAAALRDARDMLARLLDRQQAVAAAVLDHHAVMVLPGPPEADDPGPGAPPTARLLCVR
FGRLVATLTLPLPPGADDVIRLRARLARHFDPGSPRPERYLKEEVDEVRLLAHWLYVHRG
RTPTVRWQPGDDFEAFVAAVLHEARRLLR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgcagagatccccttcgtcgtgaccgacgtcgagaccaccgggatcgacccc
gggcgacatcgggtgatcgagatcgccgccgtgaaggtcgtcggaggcgtggtggtggac
cggtttacccggcttgtcaacccgggccgggccgtgccgcgccgcatcaccgcgctgacg
ggcatctcgacggccatgctctatggagagcccccgcccggggaggtgttgcccggctac
ctcgacttcctgggcgacggcgtcttcgtggcgcacaaccttccgttcgaccgcggcttc
ctcgacgccgagctggcccgtctcggtcggcccgccctcaccaacccggggctgtgcacc
ctgcgcctggcccggcggctgctccgggggctgcgctcgaagagcctcggcagcatcgcc
gccttctacggcctctctccgaacgggcggcatcgcgccctcggcgacgccgaactgacc
gcccaggtgctcctgcgcctgctgtcgcaactcggctttcaggccggcctcgagacgctc
gacgagctgctcgcctttcagaacaaaacgtacgttcatctcgaggccgggcccgggcac
ctgcaacgccttcgggaagaggtggtgccgcgcctgccccgccgccccggcgtctacttc
atgaaggacgggcagggaacgatcctctacatcggcaaggccaaaagcctgcgcgaccgg
gtgcgcagctactttacgggcatcgagtcgcacgccgagcacatccggcagatggtcgcc
ggggtgcgtgacgtggcgtgggaagagacgggctcggagctggcggccctcctgctcgaa
tcgaaactcatcaaagcccaccggccccgcttcaaccgggcccagcgccgctaccgcaac
cgtcccttcatccggctcgacgtgaccgagcccttcccgcgcgtccgctggcaggccttt
ctcgccgatgacggggccgagtacttcggcccgctggggggacggcgcgaggccgaacag
gtcgtcgaactcattcagcgctactaccggctccgcgaatgcgacgacgatacgttcgcc
cgcgggcaccggtgcctgtacgctgccatgggccggtgtgacgggccgtgtgagggcggc
gacgccgccggagcctatgcggccgaagtgcagcgcgtgcgcgactttctcaccggcagg
gatcgcaccgtgctcgaacgcctggaggccgacatgcgggcggccgccgccaacctcgac
tttgagcaggccgccgccctccgggacgcccgggatatgctggcccgcctgctcgaccgt
cagcaggccgtcgccgccgccgtcctggatcaccatgccgtgatggtgttgcccggcccg
ccggaggcggacgaccccgggcccggggcgccgcccactgcccggctcctgtgcgtgcgc
ttcggccgtctcgtcgccacgctcaccctgcccctgcccccgggggcggacgacgtgatc
cggctccgcgcccggcttgcccggcacttcgatcccggcagcccgcgtcccgaacggtat
ctcaaagaggaggtcgatgaagtccgcctcctggcgcactggctctatgtccaccgcggc
cggaccccgacggtccgctggcagcccggcgatgacttcgaggcctttgtcgccgccgtg
ctgcacgaagcccgccgtctcctccgctga
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