Rhodocaloribacter litoris: GQ464_014945
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Entry
GQ464_014945 CDS
T09819
Name
(GenBank) lamin tail domain-containing protein
Organism
rlo
Rhodocaloribacter litoris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LTD
Big_5
FlgD_ig
AidB_N
SWM_repeat
CopC
CHU_C
Motif
Other DBs
NCBI-ProteinID:
QXD14708
LinkDB
All DBs
Position
complement(3622615..3626943)
Genome browser
AA seq
1442 aa
AA seq
DB search
MHTTRTRHLLARLLLAAAFGGAGPAAAQFVETFADGDFTQDPAWTGTTAHWAVVPFGDDF
ALRSDGPTAADTLYLATASTQAYGRWALTFRYEGGALSNFNLVRIFLLADGPDLTGAVRG
YHLQLGTNSRDVRLYRSDPDVAGGRTLLGQSAPDVVTDEARTLGVTVTRTEAGDWTVTLD
GAPVLAVAETGTPVTTGSHFGLWVKHSATRNRGYFFDDLVVTPGLEDTTPPVVTGVTYEV
TLPGFFARFSELIDFSSIDGDDVSVPGIDRIVSMSPVSGVNETDGISIQLATFLPSGDYD
VRLRDIADLAGNVLRDTTVTVTVVADETPPVLLGAEAISATEVHVTFDEPVGLDPGAFTL
SENVTVTGILNPMIPEFPYAEVVMLEVFPPLAPGITYTLTVHDLADPFGNVLEEAAAAFT
FSGEPFVPAPGDVVVNEILYAPPPGGSEYVELLNRTGHTLDLRAFRLADDRNSPVPLTTE
TTALPPGGFAVLAQDSTAFAAAFPGVPFLPVENFPALNNAGDAVVLFFEETVLDSVAYRP
GWGGAGGAALERRDPAGPSNLALNWGTSTDPRGGTPGAVNTLFAPDTTPPALLSALPART
GDTLTVTFSEPLDPATVTPGDFTIENGGTVTPETVSVDEATATLVLAMPLPPGTYRLVVR
DVADFFGNILAEDVRAFTVLAPVTPARGEVVVNEILYAPPPGGSEYVELLNRTGHTLDLR
AFRLADDRNSPVPLTTETTALPPGGFAVLAQDSTAFAAAFPGVPFLPVENFPALNNAGDA
VVLFFEETVLDSVAYRPGWGGAGGAALERRDPAGPSNLALNWGTSTDPRGGTPGAVNTLF
APDTTPPHPFFADQVGERHAEVFFSEPLDPATVTPGDFALDGTGPAALVLAEGDTRVRLT
FDAGLPGLSQPNPLMLTVRDVADLTGNVLAEATVPLARQAAPGDVVVNEILYEPRADPRD
GFIDQPEYIELFNRSGHLISLRGLFRTNVPDETGAADTTRLAADPVAIAPGGFAVVFAEP
KVLDEDALYAQSSLVLAFPEDYRRLGVTLLPVRAATLGLRNDGDLVRLHRPDGTVVDEVV
YDPAWHDAARATTQGVALERIDPDAPAQAATNWASATAPAGGTPGRPNSVAPVTARPPQP
GELVVNEILYEPRADPGDGRPDQPEYFELFNRTGEPLALNGLLLTGRPDEQGRADTLRIA
FTPVALPPGGFAVVYGVPPGTPDDSLRLVLERPFPTLPAGDPGLVLLPLRRSLALDNAGD
LVRLHRPDGTIVDEVAYDPAWHHPGLRERRGTALERIDPDAPAGLASNWTSSVAPAGGTP
GARNSVYLRPGEPRAAPGLVVEPSPFSPDRDGHEDVTAIRYTLRQAPALVRARIFDAGGR
LVRTLEAAALAGRSGTLFWDGLDDHARPLRVGIYVVHLEAIAADAGTREAYKAPVVLARP
LD
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgcataccacgcggacgaggcatctgcttgcccggctgctgctggccgccgccttcggc
ggagccggcccggccgccgcccagttcgtcgagaccttcgccgacggcgacttcacgcag
gacccggcgtggacaggcaccacggcacactgggcggtggtgccgttcggggacgacttc
gcgctgcgctccgacggccccaccgcggccgacacgctctacctggcaacggcctccaca
caggcctacggccggtgggcgctcaccttccgctacgaaggcggggcgctgagcaacttc
aacctcgtacgcatcttcctcctggccgacgggccggacctgacgggagcggtgcgcggc
taccacctccagctcggcaccaacagccgtgacgtccgtctctaccgcagcgacccggac
gttgccgggggccgtaccctgctcggccagtccgcccccgacgtcgtcacggacgaggcc
cgcacgctcggcgtcaccgtcacccgcaccgaagcgggagactggaccgtgacgctcgac
ggcgcccccgtgctggccgtcgccgagacgggaacgcccgtcaccaccggcagccacttc
gggctgtgggtcaagcattccgccacccgcaaccggggatacttcttcgacgacctggtg
gtcacgcccggcctcgaggacacgacgccgcccgtcgtcaccggcgtgacgtacgaggtc
acgttgccaggcttcttcgcccgcttctccgagttgatcgacttcagcagcatcgacggg
gacgacgtctccgtcccgggcatcgaccggatcgtgtcgatgtcccctgtctcgggcgtc
aacgagacggacgggatttccatacaactcgccaccttcctcccttcgggcgactacgac
gtgcggctccgtgacatcgccgacctggccggcaacgtcctgcgggacaccaccgtcacg
gtgaccgtggtggcggatgagacgccgcccgtgctcctcggcgccgaagccatctcggcc
acggaggtgcacgtcaccttcgacgagccggtcggcctggatcccggagccttcaccctc
tcggagaacgtcaccgtcaccggtatcctgaacccgatgatcccggagtttccctatgcg
gaggtggtcatgctggaggtttttccgccgctggcgcccggcatcacctatacgctcacc
gtgcacgacctcgccgacccgttcggcaacgtgctcgaggaggccgccgccgcgttcacc
ttctccggggagcctttcgtcccggcgccgggcgacgtcgtcgtcaacgagatcctctac
gccccgccccccggcggcagcgagtacgtcgaactcctcaaccgcaccggccacacgctc
gacctgcgcgccttccgcctcgccgacgaccgaaacagccccgtccccctcaccaccgaa
acaacggcgctgccccccggcggcttcgccgtgctcgcgcaggacagcaccgccttcgca
gccgccttccccggcgtccccttcctcccggtcgagaacttccccgcgctcaacaacgcg
ggcgacgccgtcgtgctcttcttcgaagagacggtgctcgactcggtggcctaccggccc
ggctggggcggggcgggaggcgccgcgctggagcggcgggacccggccggtccttcgaac
ctggcgttgaactggggcacctccaccgatccgcgcgggggcactcccggcgccgtgaac
accctcttcgcgccggacaccaccccgcccgccctgctctccgcccttccggcccggacg
ggcgacaccctcacggtgacgttctccgagccgctggaccccgccaccgtcacgcccggc
gacttcaccatcgagaacggcgggacggtgacgccggagacggtctccgtcgacgaagcc
accgccacgctcgtcctggccatgccgctcccgccgggcacctaccggctcgtcgtccgc
gacgtggctgatttcttcggaaacatcctggccgaagacgtacgggcgttcacggtgctc
gcgccggtgacgcctgcccggggggaggtggtcgtcaacgagatcctctacgccccgccc
cccggcggcagcgagtacgtcgaactcctcaaccgcaccggccacacgctcgacctgcgc
gccttccgcctcgccgacgaccgaaacagccccgtccccctcaccaccgaaacaacggcg
ctgccccccggcggcttcgccgtgctcgcgcaggacagcaccgccttcgcagccgccttc
cccggcgtccccttcctcccggtcgagaacttccccgcgctcaacaacgcgggcgacgcc
gtcgtgctcttcttcgaagagacggtgctcgactcggtggcctaccggcccggctggggc
ggggcgggaggcgccgcgctggagcggcgggacccggccggtccttcgaacctggcgttg
aactggggcacctccaccgatccgcgcgggggcactcccggcgccgtgaacaccctcttc
gcgccggacaccaccccgccgcaccccttcttcgccgaccaggtcggcgaacggcacgcc
gaggtgttcttctccgagccgctggaccccgccaccgtcacgcccggcgacttcgcgctc
gacgggacggggcctgccgcccttgtgctggccgaaggggacacgcgggtccgcctcacg
ttcgacgccgggctcccgggcctctcgcagccgaacccgctcatgctcaccgtgcgcgac
gtggccgacctgaccggcaacgtgctggccgaggccacggtgccgctggcccgccaggct
gccccgggcgacgtcgtcgtcaacgagatcctctacgagccgcgggccgacccccgcgac
gggttcatcgaccagccggaatacatcgagctcttcaaccgcagcggccacctcatcagc
ctccgcggcctcttccgaacgaatgtgcccgacgagacgggtgccgccgatacgacccgg
ctggcagcggatccggtggccatcgcgccgggtggttttgccgtggtcttcgccgagccg
aaagtcctcgacgaggacgccctctatgcccagtcgtcgctggtgctggccttccccgag
gactaccgccgcctgggtgtcacgctgctgcccgtgcgggcggccacgctcgggctgcgc
aacgacggggacctcgtccgcctccaccggccggacggcaccgtcgtcgacgaggtcgtc
tacgaccccgcctggcacgacgcggcacgcgccaccacgcagggggtggccctcgaacgc
atcgacccggacgcgccggcgcaggcggcaaccaactgggccagtgccaccgccccggcc
ggcggcacgcccggccgcccgaacagcgtcgcccccgtgacggcccgtccgccgcagccc
ggcgagctggtcgtcaacgagatcctctacgagccgcgggccgaccccggcgacgggcgc
ccggaccagcccgagtacttcgaactgttcaaccggacgggcgaacccctggccctcaac
ggcctgctgctgacgggccggccggacgagcagggccgggccgataccctgcgcatcgcc
ttcaccccggtggccctgccgccgggcggcttcgccgtcgtctacggcgtgccgcccggt
acgccggacgacagcctccgcctcgtcctcgaacgccccttccccaccctgccggccggc
gaccccggcctcgtgctcctgcccctgcggcgcagcctcgccctggacaacgcgggcgac
ctcgtccgcctccaccggccggacggcaccatcgtcgacgaggtcgcctacgaccccgcc
tggcaccacccgggcctccgggaacggcgcggcacggccctcgaacgcatcgacccggac
gcccccgccggcctggcctccaactggacgagcagcgtcgccccggccggcggcaccccg
ggcgcccgcaacagcgtctacctccgccccggtgaaccccgggcggctcccggcctcgtc
gtcgaaccctcacccttctcgccggaccgcgacggccacgaagacgtgacggccatccgg
tataccctgcgccaggcccccgcgctcgtccgcgcccgcatcttcgacgccggcggccgg
ctcgtgcggaccctcgaagcggccgcgctcgccgggcgttccggcaccctgttctgggac
ggcctcgacgaccacgcccgccccctgcgcgtcggcatctacgtcgtccacctcgaagcc
atcgccgccgacgccggcacacgcgaagcctacaaagcccccgtcgtgctcgcccgaccg
ctcgactga
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