Rhodocaloribacter litoris: GQ464_016950
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Entry
GQ464_016950 CDS
T09819
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rlo
Rhodocaloribacter litoris
Brite
KEGG Orthology (KO) [BR:
rlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlo03016
]
GQ464_016950 (truA)
Enzymes [BR:
rlo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GQ464_016950 (truA)
Transfer RNA biogenesis [BR:
rlo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GQ464_016950 (truA)
Prokaryotic type
GQ464_016950 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QXD15072
LinkDB
All DBs
Position
complement(4094474..4095220)
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AA seq
248 aa
AA seq
DB search
MPTYRLLIEYDGTDFHGWQVQPNGPTVQEALERAATTVLRQPVSIIGSGRTDAGVHARGQ
VAHFTTGTPVNVDRLRNALNGLLPPSIAVLALEEAPDGFHARYSARRRRYHYYTGLHPHP
LERAWRHVLRPAPDFERMNRAAAALRGTHDFSAFCRTRSETENRRCTVFEAHWVAEDRPG
DWHFRITADRFLHGMVRAIVGTLLEIGRGKRPEDDLLRVLASGDRREAGPAAPARGLVLE
HVEYACDG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacctaccggcttctgatcgaatacgacggaacggactttcacggatggcaggtg
cagccgaacggcccgaccgtgcaggaggccctcgaacgggcggccacgacggtactccgg
cagccggtctccatcatcggttcggggcggacggatgccggggttcacgcacgcggccag
gtggcccatttcaccaccggtacgccggtgaacgtggaccggttgcgcaacgcgctcaac
ggcctcctcccgccgagtatcgccgtactcgccctcgaggaagccccggacggctttcat
gcccgctacagcgcccgccggcggcggtatcattactacacgggtctccacccacacccg
ctcgaacgcgcgtggcgccacgtgctgcggcccgccccggacttcgaacggatgaaccgc
gccgccgccgcgctccggggcacgcacgatttcagcgccttctgccgtacccgctccgag
acggagaaccgtcgttgcaccgtcttcgaggcgcactgggtggccgaagatcgtcccgga
gactggcacttccgcatcaccgccgaccggttcctgcacggcatggtgcgggccatcgtc
ggaacgctccttgaaatcggacgggggaaacgcccggaagacgacctgctgcgcgtactc
gccagcggcgaccggcgcgaggccggcccggcggccccggcacgcggcctcgtcctcgaa
catgtcgaatatgcctgcgatgggtag
DBGET
integrated database retrieval system
