Ruminococcus lactaris: NQ541_03280
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Entry
NQ541_03280 CDS
T08757
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rlr
Ruminococcus lactaris
Pathway
rlr03420
Nucleotide excision repair
rlr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ541_03280 (pcrA)
03430 Mismatch repair
NQ541_03280 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlr03400
]
NQ541_03280 (pcrA)
Enzymes [BR:
rlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQ541_03280 (pcrA)
DNA repair and recombination proteins [BR:
rlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ541_03280 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NQ541_03280 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
MSSS
DUF4484
SPATA6
Motif
Other DBs
NCBI-ProteinID:
UWP66145
LinkDB
All DBs
Position
682217..684520
Genome browser
AA seq
767 aa
AA seq
DB search
MSIYDKLNEPQREAVYHTDGPLLILAGAGSGKTRVLTHRIAYLIEERNVNPWNILAITFT
NKAAGEMRERVDSLVGFGSESIWVSTFHSMCVRILRRFIDRLGYDNRFTIYDTDDQKTLM
KEVCKKVAIDTKVFKERSLMSAISSAKNELILPDEFELNAGGDFAKLKIAKVYREYEAQL
KANNALDFDDLLVKTVQLLQTQPDVLENYQERFRYIMVDEYQDTNTVQFQLVRLLAGKYR
NLCVVGDDDQSIYKFRGANIRNILDFEHEFSDACVIKLEQNYRSTGNILNAANRVIANNK
GRKEKTLWTANGEGELVHLRQFDTGYDEADFIAEDIKKEVRAGASYNDHAVLYRTNAQSR
LLEEKFVAMNVPYKIVGGVNFYARREIKDLLAYLKTIDNGMDDIAVRRIINVPKRGIGLT
TINRIQESAAERGLGFYETLMAPELIPGIGRSAAKLDSFAALIEYFKGLTGQMSITDLLR
EVIEKTGYMESLDSEDKEDAQARKENIDELINKAAAYEEAAEDRDEPATLSAFLEEVALV
ADIDSLDEEQDYVVLMTLHSAKGLEFPHVYLAGMEDGLFPSYMTITSDDRDDLEEERRLC
YVGITRAEQELTLTCARRRMVRGETQYNKISRFIKEIPAELLDTGSRRIEPETEVPVQQN
TYAHAREAFRARAFGAAYSNGAGKSSGVSSGKSSQGLASLQKGSQLAAGSGGSPDYAEGD
RVRHVKFGEGTVLEIRSGGRDYEVTVDFDSAGVRKMFAKFAKLVKIS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttatgataaattgaacgaaccccagagagaggcggtatatcatacagatgga
cctctgttgatcctggcgggtgcaggttcgggaaagacccgggtactgacgcacaggatc
gcatatctgatcgaagagcggaatgtgaatccgtggaatatcctggcgatcacgtttacg
aacaaggcagcaggagagatgagagaaagggtggattccctggtgggttttggctcggaa
agcatctgggtaagcacttttcattcgatgtgtgtgcggattttaagaagatttatagac
cggcttggttatgataaccgttttacgatctacgatacagacgaccagaagactctgatg
aaagaagtctgtaaaaaggtcgccattgatacaaaggtttttaaagagagaagccttatg
tcggcgatttcttctgccaagaatgaactgatccttccggatgagtttgaactgaatgca
ggaggagattttgcaaagctgaagattgcaaaagtataccgtgagtatgaggcacaactg
aaggcgaataatgcactggattttgatgatctgctggtgaagacggttcagcttctgcag
acgcagccggatgtgctggagaattatcaggagcggtttcgctatattatggtcgatgag
tatcaggatacgaatacagtgcagttccagcttgtaagactgcttgccggaaagtatcgg
aatctgtgcgtggtgggagatgatgaccagtcgatctacaagtttcgtggagcgaatatc
cgcaatattctggattttgagcatgaattttcagatgcctgtgtcataaagctggagcag
aattaccgctccacgggcaatatcctgaatgcagcgaaccgggtgatcgccaataataaa
ggcaggaaagaaaagactttatggactgccaacggggagggagagctggttcatttaagg
cagtttgatacaggatatgatgaggcggattttattgcagaagatataaaaaaggaagta
agggcaggagcatcatataatgaccacgcggtgctttacagaacgaatgcacagtcccgt
cttttggaagaaaaatttgttgcgatgaatgtcccgtacaagattgtgggcggtgtcaac
ttttatgcccgccgggagatcaaggatctgcttgcgtatttaaagacgattgataatgga
atggatgatattgcggtacgaagaatcattaatgtgccaaaaaggggcattggtctgact
acgatcaaccggatccaggagtctgctgcagaacgtgggcttggattttatgagacgctg
atggctcccgagttgatccctggaatcggaagaagtgcagcaaagctggattcttttgca
gctctgatcgaatattttaaaggacttaccggacagatgagcattacggatctgctgcgg
gaagtgatcgaaaagacgggatatatggagagtctggattccgaggataaagaggatgca
caggcgagaaaggaaaatattgatgaactgatcaataaggcagccgcatacgaagaggca
gcagaagatagagatgaaccggctacattgagtgcttttctggaagaagtggcgttggtt
gcggatattgacagtctggatgaagaacaggattatgttgtccttatgacactgcacagt
gccaaagggctggagttccctcatgtatatctggcaggaatggaagatggcttgtttcca
agttatatgacgatcacatcagacgacagagatgatcttgaagaagaaagacggctttgt
tatgtggggattacaagagcagagcaggagctgacgcttacctgtgcaagaagaaggatg
gtcagaggcgagacccagtataataagatttcacgttttattaaggaaattccggcagaa
cttctggatacaggaagccgcaggattgaaccagagacggaagtgccggtacagcagaat
acatatgcacatgcaagagaagcattccgggcaagggctttcggtgcggcttatagcaac
ggggcaggaaaaagcagcggagtttcttcgggtaagagcagccagggactggcatctctt
caaaaaggcagccagcttgcagcaggatcaggtggcagtcctgattatgcagaaggagac
cgggtgcgtcatgtgaagtttggggagggaaccgttcttgagattcggtccggtggcaga
gattatgaagtaacggtggattttgacagtgcaggagtcaggaagatgtttgcaaagttc
gcaaaactggtaaagatttcatag
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