Ruminococcus lactaris: NQ541_04105
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Entry
NQ541_04105 CDS
T08757
Name
(GenBank) alpha-amylase family glycosyl hydrolase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rlr
Ruminococcus lactaris
Pathway
rlr00500
Starch and sucrose metabolism
rlr01100
Metabolic pathways
rlr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rlr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
NQ541_04105
Enzymes [BR:
rlr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
NQ541_04105
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
GHL10
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
UWP66292
LinkDB
All DBs
Position
complement(889931..892042)
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AA seq
703 aa
AA seq
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MQNNQTDLVLVPAGQLKPLDTICGFQVRPGFFLDFGATVIPGGVNFTIQSHKATSCELLL
FHREAEEPFAVLPFPDNYRIGFCYSMIVFGLDIEEFEYAYRLDGPYDEKMGLRFDRTKVL
LDPYARAVTGQSHWGHKNNPQHGYRARVVHSNFDWGQQRHTSIPMEDLIIYELHVRGYTK
DASSGVKHPGTFDGLKEKIPYLKGLGVNAVELMPVFEFDEMRDARLIDENLLLDFWGYNP
VSFFAPNTSYSSSKEYNREGMELKSLIKELHDQNMEVILDVVFNHTAEGNEFGPSFSFKG
FDNQIYYMLTPDGHYYNFSGCGNTLNCNHPVVQNMILDCLRYWVIEYRVDGFRFDLASIL
GRNEDGTPLHQPPLLRSLAFDSILGNVKLIAEAWDAGGLYQVGSFPSWKRWAEWNGRYRD
DMRRFLKGDDFLSQAAARRITGSPDLYDPVFRGRNASVNFLTCHDGFTLYDLYSYNEKHN
EANGWGNTDGADDNNSWNCGVEGDTTDPSVLALRRKMMMNACAVLMCSRGTPMFLAGDEF
ADTRYGNNNPYCQDNLISWLDWSLLEKNRALYEFFRYMIHFRKAHACIRKDLEPSYLGFP
SMSLHGLTPWKPDLPESSHTACVLFSGYDDSLHKEDLVFLAVNTHWCSAALTLPQLPDGY
TWKIAVNTGDKKQQTFTDSEIPAAGSSVLLGERSVIVFVGERN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaataatcagaccgatcttgttcttgtccctgccggacaattaaaacccttagac
actatctgcggatttcaggtgcgtcccggattttttcttgatttcggtgcaaccgtgatc
cctggtggagtcaacttcacgatccagtcgcataaggcaacctcctgcgaacttttactg
ttccaccgggaagcggaagagccctttgccgttcttccatttcctgataattaccgcatc
ggattctgctattccatgatcgtatttggtctcgacattgaagaatttgaatatgcttac
cggctggacggaccttatgacgagaagatggggctccgctttgaccgtaccaaagtcctg
cttgacccttatgcccgtgccgtaaccgggcaaagccactggggccataaaaataatccg
caacatggctaccgggcacgtgtcgttcattctaacttcgactgggggcagcagcgtcac
acttccatcccgatggaagatctcatcatttatgaactgcacgtccgcggctacacaaag
gatgcaagttcaggagtgaaacatcccggtactttcgacggtctgaaagaaaagattcct
tacctgaaaggccttggggtcaatgccgttgagctgatgccggtctttgaatttgacgaa
atgcgggatgcacgacttattgatgaaaacctgctgctcgacttctggggatataacccg
gtcagcttttttgcaccaaataccagctacagctcttctaaagagtacaaccgcgaggga
atggaactgaaaagtctgatcaaagaacttcatgaccagaacatggaggtgattctggat
gtggtttttaaccatactgccgagggaaatgaatttggcccatccttttctttcaaaggc
tttgacaaccagatttactacatgctcactcccgatggacattattataatttcagtggc
tgcggaaatacgctcaactgtaatcatcccgtagtgcaaaatatgatcctggactgtctt
cgttactgggtgatcgaataccgtgttgacgggtttcggttcgaccttgcttccattctc
ggacgcaacgaggacggaactcctctgcaccagcctccgcttctccgcagtctggctttt
gattccatccttggaaatgtaaaactgatcgcagaagcctgggatgccggcggactctac
caggtcggatcttttccctcctggaaacgctgggctgagtggaatggacgttaccgggat
gatatgcgtcgttttctgaaaggagatgattttctttcccaggctgctgcccgccggatc
accggttcacccgatctttatgatccggttttccggggcaggaatgcttctgttaatttt
ctgacctgccacgatggatttacgctttacgatctctacagctataatgaaaagcacaat
gaagccaatggctggggaaatacagacggtgcagatgacaacaacagttggaactgtggt
gtggaaggagatacaacggatccttccgtcctggctcttcgcagaaaaatgatgatgaat
gcctgtgctgtcctgatgtgcagccgtggcactcctatgtttctcgccggagatgaattt
gctgatacacgctatggaaataataatccctactgtcaggataatctgatctcctggctg
gactggtcacttttagagaagaacagagcattgtatgagtttttccgttatatgatccac
ttcagaaaagctcatgcctgtatccgcaaagaccttgagcctagttatctcggttttccg
tccatgagtcttcatggtctcactccatggaaacctgacctgccggaaagcagtcacact
gcctgcgttctcttttcaggttatgatgactctttgcacaaagaagatctggtcttcctt
gccgtgaatacacactggtgttccgctgctctgactctgcctcagctcccggacggctat
acctggaagattgccgtcaatacaggagacaaaaaacagcagacattcacggattctgaa
atacctgctgccggttcctccgttctgcttggagaacggtctgttattgtatttgtgggg
gaaagaaattaa
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