Ruminococcus lactaris: NQ541_05065
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Entry
NQ541_05065 CDS
T08757
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rlr
Ruminococcus lactaris
Pathway
rlr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ541_05065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlr03019
]
NQ541_05065
03016 Transfer RNA biogenesis [BR:
rlr03016
]
NQ541_05065
Enzymes [BR:
rlr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NQ541_05065
Messenger RNA biogenesis [BR:
rlr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NQ541_05065
Transfer RNA biogenesis [BR:
rlr03016
]
Prokaryotic type
tRNA degradation factors
NQ541_05065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KhpA-B_KH
DUF4891
KH_5
Motif
Other DBs
NCBI-ProteinID:
UWP66463
LinkDB
All DBs
Position
1083300..1085387
Genome browser
AA seq
695 aa
AA seq
DB search
MFKKFEMELAGRTLRVDVDRVAKQANGAVLMHYGDTTVLCTATASDKPRDGIDFFPLSVE
YNERMYSVGKIPGGFNKREGKASENAILTDRVIDRPMRPLFPKDYRNDVTLENLVMAVDQ
DCSPELTAMLGAALATSISDIPFDGPISTTQVGLVDGEFVFNPTAAQKVVSDLALTVAST
KEKVIMIEAGAKEVPEDKMIEAIFAAHELNQKVITFFDTIVAECGKKKHEYQSFAVPQEL
FDAIQEIVTPAEMEEAVFTDDKQTREENIRVITEKLEEAFADNEEWLAKLGEAVYQYQKK
TVRKMILKDHKRPDGRAIDQIRPLAAEVDLISRVHGSAMFTRGQTQICTVTTLAPLSEAQ
RLDGLDETETTKRYMHHYNFPSYSVGETRPSRGPGRREIGHGALAERALLPVLPSEAEFP
YAIRTVSETFESNGSTSQASVCASSMSLMSAGVPIKSAVAGISAGLVTGETDDDYLVLTD
IQGLEDFFGDMDFKVAGTHKGITAIQMDIKIHGLTRPIIEEAIAATKKARTYIMDEVMSK
AIAEPRAEVGEFAPKIIQMQIDPQKIGDVVGQRGKTINAIIEETGVKIDIDDDGNVSICG
TEKENMEKAAKYIHTIVTDYEAGQLFEGKVVSIKEFGAFVEFAPGKEGMVHISKLSKNRV
EKVEDVVSLGDVVKVVCLGKDKMGRFSFSMKDVAE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaagtttgaaatggaacttgccggcagaacactgcgtgtggatgttgaccgc
gtggcaaagcaggcgaacggtgcagttctgatgcactatggtgatacaactgtattatgt
acagcgacagcttctgataaaccgagagacggaattgatttcttcccgctcagtgtagaa
tacaatgagagaatgtattctgtaggaaagatcccgggaggcttcaataagcgtgaggga
aaggcatcagagaatgcgatcctgacagaccgtgttattgaccgtccgatgcgtccgctg
ttcccgaaggattacagaaatgatgtaacactggaaaatctcgttatggcagttgatcag
gattgcagcccggaactgacagcaatgctcggagccgcactggcaacaagtatttccgat
attccatttgacggtccgatctctacgacacaggtaggactggtagatggagagtttgta
tttaacccgacagccgcacagaaggttgtatcggatcttgcactgaccgttgcatctaca
aaagagaaagtaatcatgatcgaagcaggagcaaaggaagttcctgaagataagatgatc
gaggcaatctttgcagcacatgaactgaaccagaaggtgattactttctttgatacgatc
gttgcagagtgcggaaagaaaaagcacgagtatcagagtttcgcagttccgcaggaatta
tttgatgccatccaggaaatcgttactccggcagagatggaagaagctgtatttacagac
gacaagcagacaagagaagaaaatatccgtgtcattactgagaagctggaagaggcattt
gccgacaatgaagaatggcttgcaaagctgggtgaagctgtatatcagtaccagaaaaag
accgtaagaaaaatgatcctgaaagaccataagcgtccggatggacgtgccatcgatcag
atcagaccgctggcagcagaggttgacctgatttcgagagttcatggttcagcaatgttt
acgagaggacagacacagatctgtactgttacaacgcttgcaccgctttctgaggcacag
agactggacggactggatgagacagagacaacaaagagatatatgcatcattataatttc
ccgtcttactctgttggcgagacaagaccttccagaggaccgggacgtcgtgagatcgga
catggagcgttggctgagagagcattgctcccggtacttccgagtgaggctgaattcccg
tatgcgattcgtactgtatctgagacgtttgaatccaatggttctacttcccaggccagt
gtatgtgcatccagtatgtcactgatgtcagcaggtgtgccgatcaagtctgctgtagcg
ggtatttctgcaggactcgtaacaggcgagacggatgatgattatctggttctgacagat
attcagggactggaagatttctttggcgatatggactttaaggttgcaggtactcataag
ggtattactgcgatccagatggatatcaagatccacggactgacaagaccgatcattgaa
gaagcaatcgcagcgacgaagaaagcaagaacttatatcatggatgaagtgatgagcaaa
gcaatcgcagagcctagggcagaagttggagagtttgctccgaagatcatccagatgcag
atcgatccgcagaagatcggagatgttgtaggacagcgtggaaagacgatcaatgcaatc
atcgaagagaccggtgtaaagattgatattgatgatgacggaaatgtatccatctgtggt
acagagaaagaaaatatggagaaggctgcaaaatatatccatacgatcgtaacagattac
gaggcaggacagctttttgagggaaaggttgtcagcattaaagaatttggagcattcgtg
gaatttgcaccgggtaaggaaggcatggtccatatttcaaagctttccaagaacagagtt
gaaaaggttgaggatgttgtaagccttggcgatgttgtgaaagtcgtatgccttggaaaa
gataaaatgggaagattcagcttcagtatgaaagatgtggcagaataa
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