Ruminococcus lactaris: NQ541_07160
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Entry
NQ541_07160 CDS
T08757
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rlr
Ruminococcus lactaris
Pathway
rlr03030
DNA replication
rlr03410
Base excision repair
rlr03420
Nucleotide excision repair
rlr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ541_07160 (polA)
03410 Base excision repair
NQ541_07160 (polA)
03420 Nucleotide excision repair
NQ541_07160 (polA)
03440 Homologous recombination
NQ541_07160 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlr03032
]
NQ541_07160 (polA)
03400 DNA repair and recombination proteins [BR:
rlr03400
]
NQ541_07160 (polA)
Enzymes [BR:
rlr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQ541_07160 (polA)
DNA replication proteins [BR:
rlr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NQ541_07160 (polA)
DNA repair and recombination proteins [BR:
rlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NQ541_07160 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ541_07160 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
HHH_2
XPG_I
Motif
Other DBs
NCBI-ProteinID:
UWP64545
LinkDB
All DBs
Position
complement(1518385..1521000)
Genome browser
AA seq
871 aa
AA seq
DB search
MREKIVLIDGHSILNRAFYGVPDLTNSEGLHTNAVYGFLNIMFKILDEEKPEYLTVTFDV
HAPTFRHEMYQEYKGTRKPMAEELRQQVPVIKEVLKAMNIEIIEQAGLEADDLLGTISHQ
CEKEGLDVSIISGDRDTLQLTTEHIKVRIPKTKQGKTEIEDYLAADVKERYGVTPTEFID
VKALMGDTSDNIPGVPGIGEKTATKIIQEYKTIENAYEHVDELKPPRASKNLKEFWEQAQ
MSKTLATIRLDAETEFDLNGARHGNPYTKEAHELFQKLQFKNLLGRFDVETSANDVEATF
CEVTGKAAIEKIFKEAEKAEKVGVAFSKDKGNVLPLFAHPSGIGRIALCYTEKKTVTIPC
DMEMDFETLAGMISGLAEKVKVFSMCGLKESLNYLPQAKRENSFDVIVAAYLLNPLKSDY
DYEDVAREQLGLLIDEKTEESTKACYEAYTAYMAVEPLNRKMEETGMTKLFREIEMPLVF
TLYEMEQAGIHVEGEALKAYGDQLGNRIVELEKEIYDMAGETFNINSPKQLGVILFEKLE
MPHAKKTKTGYSTAADVLDKLAPEYPIVAKILEYRQLTKLKSTYADGLATFIGPDGRIHG
KFNQTITATGRISSTEPNLQNIPVRMELGRLIRKVFVPKEGCVFVDADYSQIELRILAHC
SGDEQLIQAYREARDIHRMTASQVFHVPFDEVTDLQRRNAKAVNFGIVYGISSFGLSQDL
SITRKEAARYIEHYFETYPGIKTFLDQCVADAKEKGYAVTLFGRRRPVPELKSSNFMQRS
FGERVAMNAPIQGTAADIIKIAMIRVSDEMKKQNMKSRMILQVHDELLIEAAEEEVDEVK
KILKEEMEHAASLSVPLLADMHTGKNWYEAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaagattgtactgatcgatggacatagcatactgaaccgggcattttatggc
gtaccggatctgacaaattcggaaggacttcatacgaatgcggtatatggtttcctgaat
attatgttcaaaatactggatgaggaaaaaccagaatatctgacggtgacatttgatgtg
catgcaccgactttccggcatgaaatgtatcaggaatataaaggaacaagaaagccgatg
gcagaggaactgcgtcagcaggttccggtgatcaaagaggttctgaaggcaatgaatatc
gagatcattgaacaggcaggactggaagcagatgatcttcttggaacgatttctcatcaa
tgtgaaaaagagggactggatgtctcgatcatttcaggagaccgtgatacacttcagctt
accacggagcatatcaaggtgcggattccgaagacaaagcagggaaagacagagatcgaa
gattatcttgcggctgatgtgaaagagcgttatggagtgactccgacagaatttattgat
gtaaaagctttaatgggcgatacatcggataatattcccggagttccgggaattggagaa
aagacggcgacaaagatcatccaggaatataagacgattgaaaacgcatatgagcatgta
gacgaattaaagccgccaagagcaagcaagaatctgaaagagttctgggagcaggcacag
atgagtaagacgctggcgactattaggctggatgcggagacagaatttgatttgaatgga
gcaagacacggtaacccttatacgaaagaagcacatgagctgtttcagaagcttcagttt
aagaatctgctgggacggttcgatgtagaaacttcagcaaatgatgtggaagcaaccttt
tgtgaagtgacaggaaaagctgcgattgaaaagatatttaaagaggcagagaaggcagag
aaggtcggagttgcattttccaaagataagggaaatgtattgccgctgtttgcacatcca
tcaggaattggcagaatcgcactttgttatactgagaaaaagacggttacgattccgtgt
gatatggagatggattttgaaactctggcaggaatgatttctggtctggctgagaaggtg
aaagtattttctatgtgtggactgaaagaatctctcaattatttaccgcaggcaaagaga
gagaacagttttgacgtgattgtggcagcttatcttttgaatccattaaagagtgattat
gattatgaggatgtagcgagagaacaactgggtcttctgattgatgaaaagacagaggaa
agtacaaaggcatgctacgaagcttatacggcatatatggcagtagaaccgttgaaccgg
aaaatggaagaaaccgggatgacgaaattgttccgggaaatcgagatgccgctggtattt
actctgtatgaaatggaacaggcaggaatccatgtggaaggtgaagcattgaaggcatat
ggagaccagcttggaaaccggattgtagaactggaaaaagaaatctatgatatggcggga
gagacattcaatattaattctccaaagcaactgggagtgatcctttttgaaaaactggaa
atgccgcatgccaagaagaccaagaccgggtattctacagcagcagatgtgctggataag
cttgcaccggagtatccaatcgtggcaaagattctggaataccggcagcttacaaagtta
aaatcgacttatgctgacgggcttgccacatttatcgggccggatggaaggattcatggt
aaatttaaccagacaattactgcaacaggaagaatcagcagtacagaaccgaatcttcag
aatattccggtgagaatggaactggggcgtctgatccgtaaagtttttgtgccgaaagaa
ggctgcgtatttgtggatgcagattattctcagattgaactgaggattcttgcccattgt
tcgggggatgaacagttgattcaggcataccgggaggcaagggatattcatcggatgacg
gcatcccaggtatttcatgtaccgtttgatgaggtgacagatcttcagagaaggaatgcc
aaggcagttaattttggtatcgtttatggaatcagttcttttggcttaagtcaggatctg
agtattacaagaaaagaggcagccaggtatattgaacattattttgagacctatccgggg
atcaagacttttctggatcagtgtgtggcagatgcaaaagaaaaaggctatgcagtgaca
ttattcggacgaagaaggccggtgccggagctgaaatccagcaattttatgcagagaagt
tttggagaacgtgtggcgatgaatgcaccgattcagggaactgcggcagatatcatcaag
attgcgatgatccgtgtaagtgatgagatgaagaagcaaaatatgaagtcaagaatgatc
ctgcaggtgcatgatgagcttctgatcgaagcggcagaagaggaagtagacgaagtgaaa
aaaatcttaaaagaagagatggaacatgcagcgagtctgtcagttccgcttctggcagat
atgcatacaggaaagaactggtatgaggcaaaataa
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