Ruminococcus lactaris: NQ541_07290
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Entry
NQ541_07290 CDS
T08757
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
rlr
Ruminococcus lactaris
Pathway
rlr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ541_07290 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlr03019
]
NQ541_07290 (rny)
Messenger RNA biogenesis [BR:
rlr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NQ541_07290 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
FUT8_N_cat
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
UWP64570
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Position
complement(1543316..1544875)
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AA seq
519 aa
AA seq
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MQISLGLGIGIAVALALIVGVVTRFATISSLKNNADSKIGNAEAKAREIIDDAVKTAETT
KKEALLEVKEESIKTKNDLEKETKERRAELQRYEKRVLAKEESVDKRSDALEHRENKLTS
KEEHLRQREAKVEELSQQRVQELERISGLTSEQAKEYLLKTVEDDVKHDTAKMVRELETQ
AKEDADKKAKEYVVNAIQRCAADHVAETTISVVQLPSDEMKGRIIGREGRNIRTLETLTG
VELIIDDTPEAVVLSGFDPIRREVARIALERLIVDGRIHPARIEEMVEKAQKEVETMIRE
EGEAAALEVGVTGIHPELIRLLGRMKFRTSYGQNALKHSVEVAQLSGLLAGEIGLDVRIA
KRAGLLHDIGKSIDHDVEGSHIQIGADLCRKYKESATIINAVEAHHGDVEPESLIACVVQ
AADTISAARPGARRETIETYTNRLKQLEDITNQFKGVDKSFAIQAGREIRVMVVPEQVSD
DDMVLMARDIAKQIEFELEYPGQIKVNVIRESRATDYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgcagataagtctaggattaggaataggcattgccgtggccctcgcgttgatagtcgga
gttgttactcgttttgcgacaatttccagtctgaagaataatgcggacagcaaaattgga
aatgcggaagcaaaagcaagagaaattattgacgatgcagtgaaaactgccgagactact
aaaaaggaagctcttttagaagtgaaagaggaatcgatcaagacgaagaacgatcttgag
aaagagaccaaagaacgaagagctgaactgcaacgctatgaaaaaagagtgcttgcaaaa
gaagagtctgttgataaaagatccgatgctttagagcatcgtgagaacaaactcacgtca
aaagaagaacatcttcgtcaacgtgaagccaaagtagaagaacttagtcagcaacgtgta
caggaacttgaacgaatctcaggacttacctccgaacaggcaaaagaatatctgttaaaa
actgttgaagatgatgtcaagcatgacaccgccaagatggtgagagagctggagacgcag
gcaaaggaagatgccgacaagaaggcaaaagagtatgttgtcaatgcaatccagagatgt
gcggcagaccatgtggctgaaactacaatttctgtagtacagttaccaagtgatgaaatg
aagggacggatcattggacgagagggaagaaatatcagaactcttgaaactcttacgggt
gtagaactgattattgatgatactccggaagcggttgtattgtcaggatttgatccgatc
cgccgggaagtagcaaggattgctcttgaaagattgatcgttgacggtcgtatccatccg
gcaagaattgaggagatggtagaaaaggcacaaaaagaagttgagacgatgatccgtgaa
gagggagaggctgcagcactggaagtaggtgttacaggtatccatccagaattgatccga
cttcttggacgtatgaaattcagaacaagctatggacagaatgcgttgaagcattccgtt
gaagtggcacagttatcaggactgctggccggtgagattggactggatgtaaggattgcc
aagcgtgccggacttttacatgatattggtaaatccatcgatcatgatgtagaaggatca
catatccagattggtgctgatttgtgcagaaagtacaaagaatcggcaactattatcaat
gcagtagaagctcatcatggagatgttgagccggaaagtttgattgcatgcgttgttcag
gcggctgatacgatttcagcggcaagaccgggtgcgagaagagagacaatagagacatat
acaaacagattgaaacagttagaagatattaccaaccagtttaaaggtgtggataagtct
tttgccattcaggcgggtagagagattcgtgttatggtagttccagagcaggtatcagat
gatgatatggtgctgatggccagggatattgcgaagcagattgaatttgagctggaatat
ccgggtcagattaaggtcaatgtgattcgcgaatcacgggcgacagattatgctaaataa
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