Ruminococcus lactaris: NQ541_07785
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Entry
NQ541_07785 CDS
T08757
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
rlr
Ruminococcus lactaris
Pathway
rlr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ541_07785 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlr03400
]
NQ541_07785 (uvrA)
DNA repair and recombination proteins [BR:
rlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ541_07785 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQ541_07785 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_21
AAA_29
nSTAND1
RsgA_GTPase
AAA_25
cobW
DnaJ_CXXCXGXG
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UWP64664
LinkDB
All DBs
Position
complement(1658255..1661161)
Genome browser
AA seq
968 aa
AA seq
DB search
MAKKMDARQYIRIRGANENNLKNIDVDIPRNELVVLTGLSGSGKSSLAFDTIYAEGQRRY
MESLSSYARQFLGQMEKPDVESIEGLSPAISIDQKSTNHNPRSTVGTVTEIYDYFRLLYA
RVGIPHCPKCGREIAKQTVDQMVDQIMALPERTKIQLLAPVVRGRKGTHAKLFDRAKKSG
YVRVRVDGNLYELSEEITLDKNIKHNIEIIVDRLVVKPGIEKRLTDSVENVLHLAEGLLI
VDVIGEESMNFSQSFSCPDCGISIEEIEPRSFSFNNPFGACPECFGLGYKMEFSEELMIP
DPSLSINEGAITVPGWQSCADKTSFTNAILQALCREYDFDLDTPFQDYPKKVHDVLIYGT
NGKEVKVYYKGQRGEGVYDVAFDGLIKNVERRYRETGSETMKAEYETFMNITPCSACGGQ
RLKASALAVTIGEKNISEVTALSIEKLQKFLQELHLTETQQMIGGQILKEIRARIQFLMD
VGLDYLTLARATGTLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLATLK
HLRDLGNSLIVVEHDEDTMLAADYIVDIGPGAGEHGGQVVATGNAQEIMKNPASITGAYL
SGKIKIPVPTERKEPKGWLKVIGAEENNLKKINVSFPVGVLTCVTGVSGSGKSSLVNEIL
YKKLARELNRARTIPGKHKKIEGLEQFDKVINIDQSPIGRTPRSNPATYTGVFDLIRDLF
ASTPDAKARGYKKGRFSFNVKGGRCEACAGDGILKIEMHFLPDVYVPCEVCGGKRYNRET
LEVKYKGKSIYDVLNMTVEEAVEFFAHVPSIRRKMETLNDVGLSYIRLGQPSTELSGGEA
QRIKLASELSKRSTGRTVYILDEPTTGLHFADVHKLTEILRRLTEEGNTVIVIEHNLDVI
KTADYIIDIGPEGGDRGGTVVAYGTPEEVAKNSRSYTGKYLDAILKKNKDEIKRKKSPKY
MQKMTTNF
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaatggatgcccgccagtatatcaggatcaggggagcaaatgaaaataat
ctgaagaatatcgatgtggatattccaaggaatgaactggttgttttgacgggtctgagt
ggttcgggaaaatcgtctcttgcatttgatacgatttatgcagaggggcagagaagatat
atggagtcactgtcttcttatgcaagacagttcttaggacagatggagaaaccggatgta
gagagcattgaaggtctttcacctgcaatttccattgatcagaaatcgacgaaccataac
ccgcgttctaccgttggaactgtgacggagatttatgattatttccgtttattgtatgcg
agggtaggaatccctcactgcccgaaatgtggacgtgagattgcaaagcagacggtggat
cagatggtggatcagatcatggcacttccggagcggacgaagatccagcttctggctccg
gtcgtaaggggaagaaagggaacgcacgctaaattatttgacagagcgaagaagagtggt
tatgtgcgtgtccgtgtagatggaaatctgtatgaactgtcagaggagatcacactggac
aagaatatcaagcataatattgagatcattgtggatcggcttgtagttaaaccggggatt
gagaagaggctgacagattctgtggaaaatgtgctgcatctggcagaaggattgctgatc
gtagatgtaatcggcgaagagtctatgaatttcagccagagtttttcctgtcctgattgt
gggatcagtatagaagagatagagccgagaagtttttcatttaataatccgtttggagcg
tgccctgaatgttttggacttggatataagatggaattttcggaggaacttatgataccg
gatccgtcgctgagtatcaatgaaggtgcaatcacggttcctggctggcagtcctgtgcg
gataagaccagctttaccaatgcaatcctgcaggctctttgcagggaatatgattttgat
ctggatacaccttttcaggactacccgaaaaaagtacatgatgttctgatctatggaacc
aatggaaaagaagtgaaagtgtattataaagggcagcggggagaaggcgtttatgatgtc
gcatttgacggactgatcaagaatgtggaacgcaggtatcgtgagaccggttcggagaca
atgaaagcagaatatgagactttcatgaatatcaccccatgttcggcatgtggtggtcag
cggttaaaggcaagtgcattggcagtaaccataggtgaaaaaaatatttcagaggtcaca
gccctttctatagagaagcttcagaaatttcttcaggaactgcatttgacggagacgcag
cagatgatcggtggtcagatcctgaaagagatccgtgcaaggattcagtttttgatggat
gtaggactggattatctgacgctggcgagggcaacaggaactttgtcggggggtgaagca
caacgtatccgtctggcgacccagatcggttcaggactggttggagttgcttatatcctt
gatgaaccaagcattggactgcatcagagagataatgataagcttcttgcgacattgaag
catttgcgggatctgggaaattctctgatcgtggtagaacatgacgaggatactatgctg
gcagcagactatattgtagatattggaccgggagccggagaacatggcggacaggttgtt
gccacaggaaatgcacaggaaatcatgaaaaatccggcttctataacaggagcttatctc
agcggtaagattaagattccggttccgacggaaagaaaagagccaaaaggatggttaaag
gtgattggtgcagaggaaaataatctgaagaagatcaatgtcagttttccggtcggtgta
ctgacctgtgtgacgggagtatcaggttcaggaaaaagttcgctggtgaatgagatcctt
tataaaaagctggcaagagaactgaatcgtgccagaacgattccgggtaagcataaaaag
atagaaggactggagcagtttgacaaggtgatcaatatagatcagtcaccgatcggacgc
acgccacgttccaatccggcaacttacaccggtgtatttgacctgatccgtgatcttttt
gcgtctacaccggatgcgaaggcaagaggatataaaaaaggaagattcagtttcaatgta
aaaggcggacgatgtgaagcctgtgcaggggatggaatcctgaagattgaaatgcatttc
ctgccggatgtctatgtgccttgtgaggtgtgcgggggtaagcggtacaaccgggaaacg
ctggaggtaaaatataaaggaaagagtatttatgatgtcctaaatatgacggtggaagaa
gcggtagaattttttgcacatgtaccgtcgatccggagaaagatggaaacgctgaatgat
gtgggactttcgtatatccgtctgggtcagccatccacggagttatcgggaggagaggca
cagaggatcaaacttgcatccgagctgagtaaacgcagtaccggaagaacggtttatatt
ttagacgagccgacaacagggttacattttgcggatgttcataaactgacagagatatta
cgcagactgacagaggaaggaaatacagtgatcgtaattgaacataatctggatgtgata
aagactgcggactatattatagatatcggaccggagggcggagaccgtggtggaaccgtt
gtagcatacggaacaccggaagaggtggcaaaaaatagcagatcctacactggaaaatac
cttgatgcaattctaaagaaaaataaagacgaaattaaaagaaaaaaaagtccaaaatat
atgcaaaaaatgactaccaatttttga
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