Ruminococcus lactaris: NQ541_09950
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Entry
NQ541_09950 CDS
T08757
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rlr
Ruminococcus lactaris
Brite
KEGG Orthology (KO) [BR:
rlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlr03016
]
NQ541_09950 (truA)
Enzymes [BR:
rlr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NQ541_09950 (truA)
Transfer RNA biogenesis [BR:
rlr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NQ541_09950 (truA)
Prokaryotic type
NQ541_09950 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
MafB
Motif
Other DBs
NCBI-ProteinID:
UWP65046
LinkDB
All DBs
Position
complement(2121443..2122261)
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AA seq
272 aa
AA seq
DB search
MKRIRLTVAYDGTDYCGWQVQNNVATIEGELNTVLTQLTGQTVKVIGASRTDAGVHARGN
VAVFDTESSIPPERFLYAVNALLPEDIVVVDSCEVAADWHPRHCNTEKTYEYRVLNQKLP
DPMRRRDTYFVSFPLDLERMRQAAGYLEGEHDFKSFCNVHTHVEDTVRTIYRLEVIREEN
VITFRVRGNGFLYNMVRILAGTLIGVGRGLIDPEEIPAMLEAKDRQAAGMTVPPQGLTLM
KIDYLDGRVQTGGKGRRLKAEPGEGQLFRTSL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaatcagactgacagttgcctatgacggaaccgattactgtggctggcaggtc
caaaataatgtggcaacgatagaaggagaactgaatacggtactgactcagctgaccggg
cagacagtaaaggtgatcggggcgagccggacagacgcaggggttcatgcgagaggaaat
gtagcggtattcgatacggaatcttccattccaccggaacggtttctttatgccgtgaat
gcgttgctcccggaagatatcgtagtagttgattcctgcgaggtggcggcagactggcat
ccaagacactgcaatacagaaaagacctatgaataccgggtgctgaatcagaaacttccc
gatccgatgaggaggagagatacttatttcgtctcttttccgctggatttggagcggatg
agacaggcagcaggatatctggagggggagcatgactttaaaagcttctgtaatgtgcat
acgcacgtagaagatacagtccgcaccatataccggctggaagtgatccgggaagaaaat
gtgatcacattccgggtcagaggaaacggatttctttacaatatggtgcggatccttgcc
ggaacactgatcggagtcggaagaggactgatcgatccggaagagatccctgcgatgttg
gaggcaaaagaccggcaggcagcgggaatgaccgtgccgccgcagggactgacactgatg
aagatcgattatctggatggaagagtgcagacgggcggtaagggccgacggttgaaagct
gagcctggtgagggtcaattatttagaacgagtttataa
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