Ruminococcus lactaris: NQ541_10610
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Entry
NQ541_10610 CDS
T08757
Name
(GenBank) alpha-L-fucosidase
Organism
rlr
Ruminococcus lactaris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
FIVAR
F5_F8_type_C
Flg_new_2
CE2_N
GHL6
Endotoxin_C
Motif
Other DBs
NCBI-ProteinID:
UWP65169
LinkDB
All DBs
Position
complement(2276357..2281468)
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AA seq
1703 aa
AA seq
DB search
MKKKTLSMVMGLILGVTTVFGSIGTTAVTVSAASGEVTDADCADNNTDAPAADKVVPDAN
QYKYQKDELAAFCHFGPNTFNEVEWGEHYGDRSPADIFTLSNDFNADTLVSTLKNAGFKK
IIVTAKHHDGFCIWNSAYTDYCVKNTNYKNGEGDVLAEISAACTKYGLDMGLYLSPWDIH
EPSYGYYDANRNPTTKENDVLDYNDYYNNQLTEILSNDKYGNNGHFVEVWMDGAKGSGAN
AQEYDFTRWFNTIQKYEGKAAKYDADCMLFGAGAYTTVRWIGNEDGVAHENTWSKSNVNV
NANTIDSNGSTPYTKGYENGNKWTVPECDGRITSGWFWGTNKCTPKTISQLATMYFDSVG
HNATMLLNVPPNNQGTVDQAILDRVTEFGNNIEETFRTNLAKATGTTITASNVRGNDIDF
KPGNVVDGDDATYWTTDDGTKSGSLTIKWNTAKKFDVVSIEEAIQKGQHINSYKVEYKTS
DSANWQTLKSGVTIGAKRLVRTSPVSATQVKITVGTSDGKVPMLSEVGVYKASEGFQLAG
TAPEGMETTSVNDTSKFTFSSTGWNPQTGSSYINGQNTWSNKANAEFTYTFDGTKVYLMG
TKDPGHGSADVYIDEQLVETINTHATSRSTGTKIFESADLTDGHHTLRVVAKTSAAIGVE
AAYVINNGGVGMIELENSAYTMNEESTLDVKVKRVGGTKGTITAKIQPNPGSAIQDDFNT
ELAPTVTLNDGESEVTVQKAAETRRNTNTTGDRVFSIELTEKTPENAIIGFNSSARITIK
DADAINSEKLQTLVNQSVELKENLYSGGWDTFVAALKAAQETLANESATDATIRNAYTAL
ETAKNALVARTKYTTDDRFQFPWKTGTSATLEAEFATELTNSNDSDSDPSYPMKIAANTD
ASNGSFVTDMAYKDVLKYAYHADKTGTYHVVMRYRSGSDVNAKNGIRITEADGKITEKTL
EVDPTKENNSVVFGTVEFDIEVTEAGDGMISVTAPNTNKGPGIDYFIITPKNVAVESYDI
TATAGEGGTITAEGLADGKVSVTEGESATFTIAANDGYEVSDVKVDGTSVGKRTSYTFEN
VTAAHTIEATFAFINYTAANPFEFPTTKGTTKTLEAEHATELINSNDSDSDPSWPLSLGT
GDWASNGKFLNCMAYKDYAKYAYVATVPGTYTVTGTYRAGAANKLAFSEENGKITATQVD
CPSTSENGSLTVKTFTLTLEVTEAGAGTLILTAPDTNKAPQLDKFDIVLTKTADEADLTE
LQTAITNAEAILNAADKDKYSAAALVELQELVNAGKQLTTASSQADVDAKKAEITAKIAD
IQTQFTITATAGNGGKIAPTGATNVYKGTSKAFTITPNDGYHVDSLTVDGTAVDVVTEYT
FSDVTANHTIAVTFAKDAVTVAKENLLAAINTANEKLAQTDAYTPASLEALQNAVDEAQT
VYNKADATQTEVDNAKANVEAKIAALKEKADKSALRLAVKAAEGEAALTDKYTEESIAAL
QTAIDAANRVLADDNATQAEVDAQVEAVNAAKAALEEKKAPVVKEELEKAVADATEVVGA
TDKYTEASLAALQSAIDAANAVLQNSDATQDEIDAAVQAVKEARAALKAKDDDKKDDSNK
DDDKKDDNNGSDNNGGNNNGNANNGSNNNGSFNNGSSNNGTANGTSNVAKAAKTGDTSNV
AGMAMLCLAAGLVAVMARRRRTN
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaagaccctttcaatggttatgggacttattctcggagtgacaactgtattt
ggttccatcgggactacagcagtaacggtatctgcagcttccggtgaagtgacagacgct
gactgtgcagacaataatacagatgcaccggctgctgataaagttgtaccggatgccaac
cagtacaagtatcagaaagatgaacttgcagcattctgtcacttcggaccaaataccttc
aatgaggtagagtggggcgaacattacggagacagatcaccggcagatatctttaccctg
tcaaatgattttaatgcagatacactggtaagtactctgaaaaatgcagggttcaagaaa
attattgtaactgcaaagcatcatgatggtttctgtatctggaacagtgcctatacagat
tactgtgtaaagaatacaaattataagaatggtgaaggagatgtccttgctgaaatctcc
gcagcctgcacaaagtatggtctggacatgggactctatctgtcaccatgggatatccat
gaaccatcttacggatattatgatgcaaatagaaatccaacaacaaaagagaatgatgtg
cttgactacaatgattactacaataatcagttaacagaaattctcagcaatgacaagtac
ggtaacaacggacatttcgtagaagtatggatggacggagcaaagggaagtggtgcgaat
gcacaggaatacgacttcacaagatggttcaataccattcagaaatacgaaggaaaagca
gctaaatatgatgcagactgtatgctgttcggagctggtgcctatacaacagttcgctgg
atcggaaatgaagatggtgtagctcatgaaaatacctggtcaaaatcaaacgtaaatgtt
aatgcaaatacgattgacagcaacggaagcacaccgtatacaaagggatacgagaatggt
aacaaatggactgtaccggagtgtgacggacgtatcacatccggatggttctggggaaca
aataagtgtactccgaagacgatttctcagcttgcaacaatgtattttgattcagtagga
cataatgcaaccatgcttctgaatgtgcctccgaacaatcagggtacagtagaccaggca
attctggacagagtaactgaatttggaaataatatagaagaaacattccgcacaaacctt
gcgaaagcaacaggaacaacgatcacagcatccaatgtccgtggaaatgatattgatttc
aaaccgggtaatgtagtagacggtgatgatgcaacatactggacaacagatgacggcaca
aagagcggaagtctgacgatcaaatggaatactgcaaagaaatttgatgtagtttctatt
gaagaggcaatccagaaaggacagcacattaacagctacaaagttgagtacaagacatcc
gacagtgcgaactggcagacactgaagagtggtgttacgatcggtgcaaagagactggtc
agaacatctcctgtatcagcaactcaggtaaaaattactgtaggaacatcagacggtaaa
gttccgatgttaagtgaagttggtgtatacaaggcaagtgaaggattccagttagcaggt
actgcaccggagggaatggagacaacaagtgtcaacgatacaagcaagtttacattcagc
tccacaggatggaatccgcagacaggaagctcctatatcaatggtcagaatacatggtcc
aataaggcaaatgcagaatttacttatacatttgacggaacaaaagtatatctgatggga
acaaaagacccgggacatggttctgctgatgtctatattgatgaacagctggtagagacg
atcaatacgcatgcgacaagcagatccaccggaacaaagatttttgaatctgcagatctg
acagacggtcatcatacactgagagttgttgcaaagacaagtgcagcgatcggtgtagaa
gcagcttacgtgatcaataatggtggcgtaggaatgatcgaacttgaaaattctgcttac
acaatgaacgaagaatccacactggatgtcaaagtaaaacgtgtcggtggaacaaaggga
acgatcacagcaaagattcagccaaatccaggaagtgcaatccaggatgacttcaataca
gagcttgcaccaacagtaacactgaatgatggagaatcagaagtaactgttcagaaagca
gcagaaacaagacgtaacacaaatacgactggtgaccgtgtattctcaatcgaactgaca
gagaaaacaccggaaaacgcaattatcggtttcaacagttctgcaaggatcacgatcaaa
gatgcagatgcaatcaacagtgagaaacttcagacgctggttaatcagtcagtagaactg
aaagaaaatctgtattcaggcggctgggatacatttgtagcagcactgaaagcagcacag
gaaacactggcaaatgagagtgcaacagatgcaacgatcagaaatgcatatacagcactt
gaaactgcaaagaatgctcttgtagcacgtacaaaatatacaacagatgacagattccag
ttcccatggaagacgggaacaagtgcaactctggaagcagagtttgcgacagaattaacc
aatagcaatgattcagattctgatccaagttatccgatgaagattgcagcaaatacagat
gcaagtaatggaagctttgtaacagatatggcatacaaagatgtactgaaatatgcatat
catgcagataagacaggtacataccacgtagttatgagatatcgcagtggttctgatgtg
aacgcaaaaaatggaatcaggatcacagaggcagatggaaagattacagaaaagacatta
gaagttgatcctacaaaggaaaacaatagtgttgtatttggaacagtagaatttgatatt
gaagtaacagaagcaggagacggaatgatctctgtcacagccccgaatacaaataaggga
cctggaattgattacttcattatcacaccaaagaatgttgcagttgagtcttatgatatc
acagcaacagcaggtgaaggcggtacgatcacagcagaaggtcttgcagatggcaaggta
tctgttacagaaggtgaaagtgcaacattcacgattgcagcaaatgatggatatgaagtc
agcgatgttaaagttgacggaacatctgtaggaaagagaacttcctatacatttgaaaat
gtaactgcagctcatacaattgaggcaacatttgcatttataaattatactgcagcaaat
ccatttgaattcccgacaacaaagggaacgacaaagactctggaagcagagcatgcaaca
gaactgatcaacagtaatgattcagattccgatccaagctggccgcttagtcttggaaca
ggcgactgggcaagtaatgggaaattcctgaactgtatggcatacaaagattatgcaaaa
tatgcatatgtagcaacagttccgggaacatacactgtaacgggtacttatcgtgccgga
gcagcaaataagcttgcattctcagaagaaaatggaaagatcacagctactcaggttgac
tgcccgtcaacaagtgaaaatggttctctgacagtgaagacattcactcttacacttgaa
gtaacagaggcaggagcaggaactctgatccttacagcaccggatacaaataaagctcca
cagcttgataagtttgatattgtacttacaaagacagcagacgaagctgaccttacagaa
cttcagacagcgatcacaaatgcagaggcaatcctcaatgcagcagataaagataaatat
tctgcagcggcacttgtagagcttcaggaacttgtaaatgcaggaaagcagttgacaaca
gcaagctctcaggcagatgtagatgcgaagaaagctgagatcacagcaaagattgctgac
atccagactcagttcacaattacagcaacagcaggtaatggtggaaagatcgcaccgaca
ggagcaacaaatgtttacaaaggaacatccaaagcattcacgatcacaccgaatgacgga
tatcatgtagacagccttacagtagatggaactgcagttgacgttgtaacagaatataca
ttctcagacgtaacagcaaaccatacgattgcagtaacatttgcaaaagatgcagtgaca
gttgcaaaggaaaatctgcttgcagcaatcaatacagcaaatgagaagctcgcacagaca
gacgcttatacaccggcttctctggaagcacttcagaatgctgtagatgaagctcagaca
gtttacaacaaagcagatgcaactcagacagaagttgacaatgcaaaagcaaatgtagaa
gctaagattgcagcactgaaagagaaggcagacaaatctgcactgagacttgcagtgaaa
gcagcagagggtgaagcagccctgacagataagtatacagaagaatccatcgcagctctt
cagacagcaattgatgcagccaatagagttctggctgatgacaacgcaacccaggcagag
gtagatgcacaggttgaagctgtaaatgcagcaaaggcagcactcgaagagaagaaagca
ccggttgtaaaagaggagcttgaaaaggcggttgcagatgcaacagaagttgtcggagca
acagacaagtatacagaagcatcacttgcagctcttcagtcagcaatcgatgcggcaaat
gcagttcttcagaattcagatgcaactcaggatgagattgatgcagcagtacaggctgta
aaagaagcaagagcagccctgaaagcaaaagatgatgataagaaggacgacagcaataag
gatgatgacaagaaagacgataataacggatccgataataatggcggaaataacaacggc
aatgcgaataacggatcaaataataatggttctttcaacaatggatcatccaataacggt
actgcaaatggtacatcaaatgtagcgaaagcagccaagactggtgatacatcaaatgta
gcaggaatggcaatgctttgcctggcagcaggactcgttgcagtaatggcaaggagaaga
agaacaaactaa
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integrated database retrieval system
