Rhizobium lusitanum: HB780_00170
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Entry
HB780_00170 CDS
T07787
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rls
Rhizobium lusitanum
Pathway
rls03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HB780_00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rls03400
]
HB780_00170
DNA repair and recombination proteins [BR:
rls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HB780_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QND44285
LinkDB
All DBs
Position
p_2:26732..27541
Genome browser
AA seq
269 aa
AA seq
DB search
MAVRPYWKGYLKLSLVTCPVQMMPATSENEKVRFHTLNRQTQNRVVSQYVDSVTGKAVKE
KDEVKGYQRGEDEYVILEDDELENVALDSTKTIDISTFTPRDSIEWIWLDTPYYLSPNDP
VGQEAFSVIRDAMEAQNMVGISRLVITRRERAVMLEPRGKGIVLWTLRYGDEVRDEDTYF
EGIGDEQADSDMIQLIQQLIKKQTRDWTPKMLIDPVQDRLLDIIAMKKKALKKPSKSKAK
APASPAPNNVINIMDALKKSLAAETRSRK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcgtccttactggaaaggctatctcaagctctcgctggtcacctgtccggtc
cagatgatgccggcgacctctgagaacgagaaggtccgtttccataccctcaatcgccag
acccaaaaccgcgtcgtcagccaatatgtggattcggtcactggcaaagcggtgaaagaa
aaggacgaagtcaaaggctatcagcgtggtgaggacgaatacgtcattctcgaggatgac
gaacttgagaatgtcgcgctggacagcaccaagacgatcgacatctccacctttacgccg
cgcgacagcatcgaatggatctggctcgatacgccctactacctttccccgaacgatccg
gtcggccaggaagccttctccgtcatccgtgacgcgatggaagcccagaacatggtcggc
atctcccggctggtcatcactcgtcgcgaacgcgccgtgatgctggagccacgcggcaag
ggcatcgttctctggactttgcgatatggcgacgaggtccgggatgaagacacctatttc
gagggtattggcgatgaacaggcggattccgacatgatacagctcatccagcaactgatc
aaaaagcagacccgggactggacgcccaaaatgctcatcgacccggtgcaagaccggttg
cttgacatcattgccatgaaaaagaaggcgctgaagaagccgtccaaaagcaaggccaag
gctcccgcatcaccggcgcccaacaatgtcatcaacatcatggacgctttgaagaagtcg
ctggccgcagaaacccggtcccgcaaatag
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