Rhizobium lusitanum: HB780_03025
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Entry
HB780_03025 CDS
T07787
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rls
Rhizobium lusitanum
Pathway
rls00300
Lysine biosynthesis
rls00470
D-Amino acid metabolism
rls01100
Metabolic pathways
rls01110
Biosynthesis of secondary metabolites
rls01120
Microbial metabolism in diverse environments
rls01230
Biosynthesis of amino acids
Module
rls_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HB780_03025
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HB780_03025
Enzymes [BR:
rls01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HB780_03025
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QND44763
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Position
p_4:69454..70710
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AA seq
418 aa
AA seq
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MRERSDLAKIDALAPVDPEATESWWRRDDLRYINGRLTLGDCDLATAALKLETPLYVLRG
AKVIEKIVQLHQALHDAGVDHRIYYAIKANRSPQLLSFLSEKRIAGADVCSPEELKHALA
CGFREEDISFTGTSLSARDFDDLARFDCISLNLDSLSALERFGTLCPGREIGIRINPDRG
ISYTGNDMLKYSGCQTTKFGIYLDSFDDALAIAKRHALRVVRLHFHAGSGYLNEGLGDLQ
AILTASHEFMHHLPNLKEVNIGGGLGVPHRCGDRPLDLHSWADVLAKAFADRGVRIALEP
GDFLVKEAGVLLTTVTYRERRKQTEFIGVDAGFNLAMEPAFYSLPCHPVPTVPRPVPKRP
LTVVGNINEALDKWAVEHEMPPPEEGDVIALINAGGYAASMRSDHCMRGGARELYLHD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagcgatccgacctagctaagatcgacgcgcttgccccagtggacccggaagcg
acagaatcttggtggcggcgggacgaccttcgttatatcaatggccgtcttacgttgggc
gattgcgatcttgctacggcggcactaaagctggaaacgccgctctatgttttacgcggg
gccaaggtcattgagaagattgttcagttgcaccaggcgcttcatgatgcgggggtggat
catagaatctactatgctattaaggcaaaccggagcccgcagcttctcagctttctatcg
gaaaagcgaattgccggtgctgatgtttgctcgcctgaggagctaaagcatgctctggcc
tgcgggttccgtgaggaggatatctcattcaccggaacatctctcagcgcacgtgatttt
gatgatttggcacgatttgattgcattagcctcaatctcgactcgctctctgcccttgag
cggttcggcacgctttgtccaggtcgagagatcgggatccggatcaaccctgatcggggt
atcagctatactggcaatgacatgctgaaatatagcgggtgccagaccactaagtttggc
atctaccttgacagttttgacgatgcgcttgccattgcgaagcgacatgcgctcagagtc
gtgcggttgcatttccacgctggttccggatacctcaacgaaggactgggggacttgcaa
gcgatactgacagcaagtcatgagttcatgcatcacctgcccaacctcaaggaagtgaat
atcggcggcggtcttggagtgccacaccgctgtggagaccgcccgcttgatttacacagc
tgggctgatgttcttgcaaaagcatttgccgatcgtggcgttcgcatagcgctggaacct
ggtgacttcttagtcaaggaagctggcgtcttattgacgacagtcacctatcgcgaaagg
cgaaagcagactgagttcattggagtcgatgccggcttcaacctcgccatggagccagct
ttttatagtctaccctgccatcctgttcctacagttcctcgccccgtgcctaagcgccca
ctgactgtggtcggcaatataaatgaagcgctcgataaatgggccgtggagcatgagatg
ccgccgcctgaagagggtgatgttatcgcgcttatcaatgctggtggatatgctgcatcg
atgcggtctgatcattgtatgcgcggcggagcgcgcgagctttatcttcatgattga
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