Rhizobium lusitanum: HB780_06930
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Entry
HB780_06930 CDS
T07787
Name
(GenBank) family 78 glycoside hydrolase catalytic domain
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
rls
Rhizobium lusitanum
Pathway
rls00946
Degradation of flavonoids
rls01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
HB780_06930
Enzymes [BR:
rls01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
HB780_06930
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Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
SMN_YG-box
Motif
Other DBs
NCBI-ProteinID:
QND45470
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All DBs
Position
p_1:complement(830110..832425)
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AA seq
771 aa
AA seq
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MNFQPSAIRGSRVSRDWAGEMIAPLSDQGQGTAASFIANTFNLDGLTGPIELFISALGLY
RCFINGKRVGDDLLTPGWTNYDDRIAYQRYDVSDLLKSGTNRIEIWLADGWYRSPLMWKA
IPNCWGDRTAAIVDLVGPAGIILSTDTNWRSGLLPIRKSGIYFGEIYDAREEGLSESHGT
EKLSFDKTLLVAHETAPVKELQPIAPIESWIDAEGRTIHDFGQNVGGYVRYKVRGTAGAE
VQVEHSEILGPDRYFDNRNYRTAPAHTIYTLRGGGDETYAPHFTFQGFRYARITIKGEAE
IVAITSVPISSVPILAGGFTSGNALVNRLVQNTIWSQRANFIEVPTDCPQRDERLGWTGD
AQVFAATACWLTDSQSFLRKYLRDVMADQRPDGAVSHFSPDPTRLHPENFPGFAGSTGWG
DAIVVIPWVLYTHYGDRQILSECLDAMARWVDFIWSISDGPIVRPPSHWGDRGFTFGDWL
QPIGDNRKPRPTIGDDCAATLYHFISSDLLAKIAAVVGDHRLEERMTARAGKIREAFAHE
FITPSGRLAHNDQTSYALAFLYDLIPAEHQEAAKQHFRQVVIDADYKIGTGFIGTPALLP
ALTKLDLDDLAEKVFLQQEVPGWLYQVAQGATTIWERWDALAPDGTIYDPDMNSYNHYAY
GAVCQWLFESVAGISPSPSAPGFAEVIIDPAPIPSLSPVTAHHDVPQGRIEAAWELSGDK
VTYRLTLPKGCVGRFRPGRRHQNPSVDGKPVVGETTIDPGTHEIVFTLPKI
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaactttcagccatccgccattaggggcagcagggtttcgcgtgattgggctggcgag
atgatcgcgccactgtcggaccaaggtcagggcacggccgcaagcttcattgccaacacg
ttcaatctcgacggactgaccggaccgatcgagctcttcatctcggcactcggcctttat
cgttgcttcatcaacggcaagcgcgtcggcgacgatttgctgacgccgggctggaccaat
tatgacgatcgcattgcctatcagcgctacgatgtgtccgacctcctcaaatccggcacg
aaccgcatcgagatctggcttgccgacggatggtaccgctccccgctaatgtggaaggcc
attcccaactgctggggcgacaggacggcagcgatcgtggacctggtcggtcctgccggc
atcattctttccacggacacgaactggcgaagcggtctgctgccgatccgcaaatccggc
atctatttcggcgagatctatgatgcgcgcgaggaagggctttccgagagccacggcacg
gaaaagctgtccttcgacaagacgctgcttgtcgcccatgaaaccgcaccggtgaaggaa
ctgcagccaattgccccgatcgaaagctggatcgatgcagagggccgcacgatccatgac
ttcgggcagaatgtcggcggctatgtgcgatacaaggttcgtggcacggccggcgcggaa
gtacaggtcgaacattccgagattctgggccccgatcgttatttcgacaaccgcaactac
cgaaccgccccggcgcacacgatctatacgctgcgcggcggcggcgatgaaacctacgcg
ccgcatttcaccttccagggctttcgctatgcccggataacgatcaagggcgaggcggaa
atcgtcgcgatcacctcggtcccgatctcctccgtccccatcctcgccggcggcttcacc
tcgggcaatgcgctcgtcaaccggcttgtgcagaacaccatctggtcgcaacgcgccaac
ttcatcgaggtgccgaccgattgcccgcagcgcgatgagcgcctcggctggaccggcgac
gctcaggtgtttgcggcaacggcatgctggctgacggacagtcagtcgttccttagaaaa
tatctgcgcgatgtcatggccgatcagcgaccggatggagcggtttcccacttctcgccg
gatccaacgcgcctgcaccccgagaatttcccgggctttgccggctcgaccggctggggc
gatgcgatcgtcgtcatcccctgggtgctctacacccattatggcgatcgccagattctc
tcggaatgcctggatgccatggcgcgttgggtcgattttatctggtcgatctcagacggc
cccatcgtgcggccaccgtcccactggggtgaccggggctttactttcggcgattggctc
cagccgatcggcgacaaccgcaagccccgtccgaccatcggcgacgattgcgcggcaaca
ctttaccacttcatttcgagcgaccttctggcgaagatcgcagccgtcgttggcgatcac
aggctcgaagagcggatgacggcgcgcgcaggcaagatcagggaagctttcgcgcacgaa
ttcatcactccatcggggcgcctcgcacataacgaccaaacgtcctatgcactggcattt
ctctacgatctgatccccgccgagcaccaggaagcggccaagcagcatttccgccaggta
gtcatcgacgccgactacaagatcggcaccggcttcatcggcacgcccgctttgctgccg
gccctgacgaagctcgatctggacgatcttgccgagaaggtcttcctccaacaggaggtc
cccggctggctctatcaggtcgcgcagggcgcgacgacgatctgggaacgctgggatgcg
ctggcgcccgacggcaccatctacgacccggacatgaacagctacaatcactatgcctac
ggcgccgtttgccaatggttgttcgaaagcgtcgccggcatttcgccaagcccaagcgca
ccgggttttgccgaagtcatcatcgatccggcgcctatcccatcactctcgcccgttacc
gcccatcatgacgtgcctcagggtcgcattgaagccgcatgggagctgagcggcgacaag
gtgacctatcggctgacattgccgaaagggtgcgtcggacggttccgaccggggcgtcga
caccagaacccgtcggtcgatggaaagccagtcgtaggggagacgactatcgatccggga
acgcatgagatcgtcttcacgcttcccaagatctga
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