Rhizobium lusitanum: HB780_10040
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Entry
HB780_10040 CDS
T07787
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rls
Rhizobium lusitanum
Pathway
rls03030
DNA replication
rls03430
Mismatch repair
rls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HB780_10040
03430 Mismatch repair
HB780_10040
03440 Homologous recombination
HB780_10040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rls03032
]
HB780_10040
03400 DNA repair and recombination proteins [BR:
rls03400
]
HB780_10040
Enzymes [BR:
rls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HB780_10040
DNA replication proteins [BR:
rls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HB780_10040
DNA repair and recombination proteins [BR:
rls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HB780_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
MliC
Motif
Other DBs
NCBI-ProteinID:
QND46026
LinkDB
All DBs
Position
p_1:complement(1502939..1503919)
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AA seq
326 aa
AA seq
DB search
MAEQFDMFSEQAPRDHAVTRGSPKFAKPYKHAIPMSEENMVRHLSQTGRYRILQKLAPRA
IAPFARPAYPLKGTILDTETTGLNARKDEIIEIGVIAFTFDATGSIGDVTGIYGGLQQPS
VSIPTEITRLTGITDDMVAGQSIDMAALRALIEPADLLIAHNPGFDRPFCEAFSHLFSGK
PWACSNSEIDWSSRGYEGTKLGYLIGQAGYFHEGHRAVDDCFALLEVLAREMDGPASTAF
AELYEASQRSRVRIFAENSPFDMKDHLKARGYRWSDGSDGRPKSWWIEVGEEALDDELRY
LRAEIYRYPDADPPIKRLTAFDRFRA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacagtttgacatgttttcggagcaggctccgcgcgaccatgcggtcacgcgc
ggctcccccaaattcgctaaaccctacaaacatgccatccccatgagtgaagagaacatg
gtccgacatctgtcgcagacaggtcgatatcggatcctgcagaaactcgcgccgcgcgca
atcgcaccattcgcccggccagcataccccctcaagggcaccattctcgacaccgagacc
acgggcctcaatgctcgcaaggatgagatcatcgagattggcgtgatcgctttcaccttc
gatgcgacaggaagcatcggtgacgtcaccggcatctacggtgggcttcaacagccaagc
gtttccattcccactgagatcaccaggctcaccgggatcacggatgatatggtcgccgga
cagtcaatcgatatggctgcgttgcgggcgctgattgaaccggctgatctgctgatcgcc
cacaatcccggtttcgaccggccattctgcgaggcattttctcacctgttttccggcaag
ccctgggcttgctccaactccgagatcgactggtcgtcgcggggatatgaaggtaccaag
ctcggatacctgatcgggcaagcgggatatttccatgaaggtcatcgcgcggtcgacgat
tgctttgcacttctggaggtcctggctcgagaaatggatggaccggcttccaccgctttt
gccgagctctatgaagcaagccagaggtcgcgtgtccggatctttgcggagaacagcccc
ttcgacatgaaggaccatctgaaggcgcgaggctatcgctggtccgacggaagcgacggc
cgtcccaaatcctggtggatcgaggttggagaagaagcgctcgatgatgagcttcgctat
ctcagggccgaaatctatcgctatccagacgccgatccacccatcaaacgcctcacggcc
ttcgaccggttccgggcctga
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