Rhizobium lusitanum: HB780_12790
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Entry
HB780_12790 CDS
T07787
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rls
Rhizobium lusitanum
Pathway
rls00300
Lysine biosynthesis
rls00470
D-Amino acid metabolism
rls01100
Metabolic pathways
rls01110
Biosynthesis of secondary metabolites
rls01120
Microbial metabolism in diverse environments
rls01230
Biosynthesis of amino acids
Module
rls_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HB780_12790
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HB780_12790
Enzymes [BR:
rls01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HB780_12790
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Ortholog
Paralog
Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
FtsK_alpha
Motif
Other DBs
NCBI-ProteinID:
QND46498
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All DBs
Position
p_1:complement(2118463..2119839)
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AA seq
458 aa
AA seq
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MTLYRQGSDAGLSPILRPRTADLISHNGTLLIEWVEKHGSPFHLVSPEALGENARALTDV
LAQHGVNHALYYGAKVNKSPGLMHAALNAGIGVDVSSLYELRDTLALGAAGDRIVATGPA
KTRAFHDALIACKALISVDSPEELDDLSARLPEDGEPQPVLLRLRPGSQAGSRFGMDADE
VLLCLSVIAADKRFRFDGLHFHLSGYGWETRAAAIREASWLISEARAIGLTPRMIDIGGG
LPIRYVDARGYQAHIERQSAADYRNHKQPSSFYPYGGEVSAADWLGCLLAAALDDGRSIA
DYFRDENLTLALEPGRALADQAAVSVFRITRVKTLGPDTAVVFVEGSSFSACETWFASEF
LIDPIIIPAAAYTPAEKPCKAYLAGHSCLDEDVLTNRWLDFPAMPRAGDLLVYANTAGYQ
MDLLENEFHRHPMPKRFRVHHGADGMPFLTTDDLEMYL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacgctatatcggcaaggatctgatgctggtctctctcccattctgcgcccccgaaca
gctgatcttatcagccacaatggcacgttgctgatcgagtgggtggagaaacatggctcc
ccatttcatttggtaagccccgaggcattgggcgaaaatgcgcgtgcgctgaccgacgtg
ctcgcgcaacatggagtaaatcacgcgctctattatggcgcgaaggtcaacaagtcgccg
ggtttgatgcatgctgcgctcaatgccggtatcggcgtcgacgtctccagcctctatgaa
ctgcgggacacgctggcgctgggtgctgcgggagaccgcattgtcgcaaccggccctgcg
aaaacgcgggcatttcacgatgcgctgattgcctgcaaggcgctgatctcggtcgattcg
ccggaagaactggatgacctctctgcccgcctgccggaggatggagagccgcagccagtg
ctgctgcgcctgcgccccggcagtcaggccggtagccgcttcggcatggacgccgatgag
gtgctgctttgcctgtcagtcattgccgccgataagcggtttcgcttcgacggtctgcat
ttccatctctccggctatggctgggaaacgcgggccgccgcaatccgcgaagcctcctgg
ttgatcagcgaggcgcgcgcgattggcctcactcccagaatgatcgatatcggcggcgga
ctgccgatacgctatgtcgatgcgcgtggctatcaagctcacatcgagcgccagagcgcg
gcggactatcgcaaccataagcagccgtcttccttctatccgtatggcggcgaggtttcg
gccgccgactggctgggctgcctgcttgccgcggcactcgacgacggccggagcatcgcc
gactatttcagggacgagaacctcacgctggcgctggaacccggccgcgccttggccgac
caggccgccgtctccgtcttcaggatcacccgcgtcaagacgctggggccggacacggcc
gtcgtcttcgtggaaggcagcagcttcagtgcctgcgagacctggttcgcatcggagttc
ctgatcgatccgatcatcattcccgctgccgcgtacacgcctgccgaaaagccatgcaag
gcctatctcgcaggccatagctgccttgacgaggacgtactgaccaaccgctggctggat
ttccccgccatgccccgcgccggtgatcttctggtctatgccaacacagccggataccag
atggatctgctcgaaaacgaatttcatcgccatccgatgccgaagcgcttccgtgtgcat
cacggtgcggacggcatgccttttctcaccaccgacgatttggagatgtacctatga
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