Rhizobium lusitanum: HB780_13095
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Entry
HB780_13095 CDS
T07787
Name
(GenBank) hypothetical protein
Organism
rls
Rhizobium lusitanum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALTTAQ_rpt
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QND46549
LinkDB
All DBs
Position
p_1:2193754..2201649
Genome browser
AA seq
2631 aa
AA seq
DB search
MTSIVSSLSTNQIRSLSTAAVAAWTTEDVASLSTKQINVLSSAQIAALDTEDVEVLSSQQ
LSAISQTAIVGLTMDQLAVLTASDIESLSSLQIAAITTTQIGALTTDQAEALSSSQVGAL
SSSQLAALSADDIATFSTDDVAAITNKAVSGLSTASIATLSTAQIAALGTSSIASLTTTQ
VAALSTAQIAALTTTQAAALKAVQIAVMDTKGIAALSTAQIAALSTSAVASLTTSQINTL
STTQAEALSSSQVKVLNSTQIAALGTDDIATFSTDEIAAITSKAIPGLGTSLLAALSTEQ
IAALSTSAVTGLTTTQIEALSTEQVAALTVTQLGALKASQVTVMGTNDIAALSAAQVAAL
SKAAIAGLTTSQIVALSTEQVAALTSTQLGALKASQVAVMGTSDIAALSTVQVAALGTSA
ITGLTTSQIDALSTAQAEALTTIQVAVLTSTQIAALGTDDIATFSTADIAAITSRAVAGL
GTVAIAALSTDQIAALSKAGLAGLTTDQIASLSTAQAEALKTTQIIVLSSKQIAVLGTDI
VSSLSTAQVAALSTSAITGLTTDQIAALTTAQAEALSASQVKALTSTQIAVLGADDIATF
STADMAAITSKAISGLSTAAIAALSTDQIAALNTSAVAGLTTTQIAALSTDQTSALNTRI
VAGLTTGQIVALSTTQIAALTTTQLAALKASQVAVMGTNDIAVLSTVQVAALGTSAIAGL
TTSQIDALTTAQAEALTTAQVKVLSSTQIAALGTDDIATFSTDDIAAITSKAMSGLSASQ
IAALSTGQIAVLSTSAIAGLTTSQMAALTTLQAAALTTTQVAVLSSTQLSALGTDDIATF
STADIAAITSKAISGLSTSLVAELSTAQIAALGTSAITGLTTSQIASLSSGQLAALNTAK
VAMLSSTQVAALGTDVVASLSTTQVAALSVAGIAGLTTDQIAALRTTQLEALTTTQAAAL
SSTQLSALGTDDIATFSSADIAAITGKAIAGLSTAVIAALSTGQIAALSSAGVVGLTTDQ
IASLSTAQIAALTTARVGVLRATQVAALGTEVVASLSTAQIAALSTAGIAGLTTDQIDTL
STAQAEALTTAQVAALSSTQIAALETDDIATFSTADIAAITSKAIPGLSTDIIAALSTDQ
LAALGTAGIAGLTTTQIDAMSSGQVATLLTKQIAALSSTQVAALGTDIIASLSTAQIAAL
SAVGVAGLTTNQIAALSTAQAESLTTAQVAVLSSTQINALGADDIATFSTADIAAITSKA
MSGLSTTVIATLSTDQIAALSASGVAGLTTSQIAALSTAQIAAVTTARVAALNSTQIAVL
STAVIAALSTAQVAALSTSGIAGLTTDQIVALSTAQAEALTTTQVAALNSTQIAALETGD
LATFSTKDIAAIGSSAISGLSTAVIATLSTDQIAALSTAGIAGLSTEQINALSTGQIDAL
LTKQVAALSSTQVAALSTGLLAALSTTQIAALSISGIAGLSTKQIAALSTGQAEALTATQ
VGALSSKQVGALSTADIATFSTKDIAAIGSSVISGLSTAVIASLSTAQIAALSAAGITGL
STAQIVALSTGQLDALTTAQIAALNSTQLAAMDAEDMATFSTKDIAALGSSAVSGLSTAV
IATLSTDQIAALSTAGIAGLSTKQIVALSTGQAEALTTIQVGALSSTQLAALDTDDIATF
STADIAAIGSSAVSGLSTAVIAALSTGQVAALSTAGVVGFSTKQIAALNTGQIDALLTKQ
VAVLGSTQVAALNTAVVASLSTAQLAALSTSGITGLSTAQIATLGTGQAAALSTAQIGAL
GSKQVAALTTADIAALSTTQIAALSSVGIAGLSATQIAALSTDQAEALTTTQVAVLSSTQ
IAALGKDQLETFSTADIAAISSSAITGLSTDTLAAFSTAQIAALGTAGIAGLSTTQIVAL
STGQLEALTTAQVGALGSKQIAALTTADIAALSTTQVAALSTAGIAGLSTAQIAALSTDQ
AEALTTPQVAVLNSTQIAALGTDQLETFSTADIAAISSSAIQGLSTGTITALSTDQIAVL
GTAGIAGLTTAQIGALSTDQLEALTTAQIGALGSKQIAVLSTTGIAGLSTAQIAALSTSG
IAGLTTDQIAALSTNQAEALTPTQVGALSSKQIAALGADDLDTFSTADIAAISSTAISGL
STDTIAGLSTLQIAALGTAGIAGLTTAQIAVLSSDQVDALTTAQISALSSKQIAILTTAD
IVAFSTADIAAISSDAISGLPTATIAALSTVQIAALSTAGVAGLTTAQIAALNADKVEAL
TTAQIGALSSKQVAVLSAADIAALSTAQVAALSTAGVAGLSSAQVGALSIEQVEALSATQ
IAALTSTGVAGLTTADLATFSAADIAAISSSAIQGLSTAFVSSLSTAEIAALGTTSIAGL
SSLQVAALSTEQIEALSTAQIAALSSAGLAGLSADDLGTFSTAELVAISANSIGGLSTAF
IAALSKDQIAVLTTSQVASLGYNQVAALSTSQIAALSTSQLGALNAVQLAGLDAADLATF
STDRIVALNSSAIAGLTTSAIASLTTAQAEALTSSQVSGLTSAQVAALTTEELATFSTDD
IASFSSTGVAGLSTQDIASLSSEQLSTLMKSQMGHLSSDQIAAVISRYVGA
NT seq
7896 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgatcgtttcctccctgagcaccaatcagatcaggtcgctttccacagcagcg
gttgcggcttggacgacggaagacgtggcgtcgctttccacaaaacagatcaatgtgctt
tcgtcagctcagatcgcagcgttggacacggaagatgtcgaggtcctcagctcccagcag
ctaagcgctatttcacaaactgccatcgttggtttgacgatggatcaattggcagttctg
acggcgtctgacatcgaaagcctgagctcgctgcagatcgcggcgatcaccaccacgcag
atcggtgccttgacgacggatcaggcggaagccttgagctcgtcgcaagtcggtgccctt
agctcatcgcaactcgcagctttaagcgcggatgatatcgccaccttctcgaccgacgat
gtggcggcaatcaccaacaaggcggtatcaggcctatccacggcctctatcgcaaccctc
tcgacggcgcagatcgctgcgttgggcacgtccagcattgcgagcctgaccaccacccag
gtcgccgccctgagtacggcgcagattgccgccttgacgacgacccaggccgccgctctc
aaagcagtgcaaattgcggtcatggacacgaagggtatcgcagcgctttccaccgcgcag
attgccgctctcagcacgagtgcggtcgcgagcttgacgactagccagatcaataccctg
agcacaacgcaggcagaggcgctgtcctcctcgcaggtgaaggtgttgaactcgacccag
attgcggctctgggaacggatgatattgccaccttctcgaccgacgagatcgcggcgatc
accagcaaagccataccaggcttgggcacgagccttcttgcggctctctcgacggagcag
attgcggccctgagcacgagtgcggtcactggtctgacgacgacccagatcgaagccctg
agtacagagcaggttgccgccttgacggtgacccagctcggtgccctcaaggcatcgcag
gttaccgtcatgggcaccaacgatatcgccgcgctttccgccgcgcaggttgcggccctc
agcaaggccgcgatcgctggtctgacgaccagccagatcgtcgctctgagcacagagcag
gtcgccgccttgacgtcgacccagctcggcgccctcaaggcatcgcaagtcgcggtgatg
ggcaccagcgatatcgccgcgctttccacagtgcaggttgcagccttgggtacgagcgcc
attaccggcctgacgaccagtcagatcgatgccctgagcacggcgcaggcggaggctttg
acgacgatccaggtcgcggtgctgacttcgacccagatcgccgcgctggggacggatgac
atcgccaccttctcgaccgccgatatcgcggcgatcacgagcagggccgtagcgggcttg
ggcacagtcgccatcgcagccctctcgacggatcagattgccgcgctgagcaaggccggt
cttgcgggcctgacgacggatcagattgcctccttgagcacggcgcaggccgaagcgttg
aagacgacgcagatcattgtgctgagttccaagcagattgcagttctgggaacggacatt
gtttcatccctttccacagcgcaggttgccgctctaagcacctccgccattaccggcctg
accaccgaccagatcgctgccctgaccacggcgcaggcggaagccttgtccgcctcgcag
gtaaaagcgctgacttcgacccagattgccgttctgggagccgatgatatcgccaccttc
tcgaccgccgacatggcggcgatcaccagcaaagccatttcgggcttgagcacggccgct
atcgcagccctctcgacggatcagattgcggccctgaacaccagcgcggttgcaggcctg
acgacgacccagatcgccgccctctcgacggatcagacgagcgccctgaacacgcgtatc
gtcgcgggcctgacgaccgggcagatcgtggctctgagtacgacgcagattgcggccttg
acgacgacccagcttgccgccctcaaggcatcgcaggtcgcggtgatgggcaccaacgat
atcgcggtgctttccactgtacaggttgcagctctgggcacgagtgcgatcgcaggcctg
acgaccagccagatcgatgccctgaccacggcgcaggcagaggccttgacgacggctcag
gtgaaagtgctgagctcgacccagattgccgcgctggggacggatgatatcgccaccttc
tcgaccgatgatatcgcggcgatcaccagcaaagccatgtctggcttgagcgctagccag
atcgcggccctgtcgacgggccagattgcggtcctaagcacgagtgcgatcgctggtctg
acgaccagccagatggcagccctcactaccctccaagcggcggccttgacgacgacccag
gtggcggtgctgagctcgacgcagctttccgcgctgggaacggatgacatcgccaccttc
tcgaccgccgatatcgcggcgatcaccagcaaagccatatcgggcttgagcacgagcctt
gtcgcagaactttccaccgcacagatcgcggccttgggcacgagcgccatcaccggcctg
acgaccagccagatcgcaagcctgagtagcggccagcttgctgctttaaacaccgcaaaa
gtcgctatgctgagttcgacgcaggtcgctgccctcggcacggatgttgtcgcatccctg
tccacgacacaggtcgccgccctgagtgtcgccggcatcgcgggtctgaccaccgaccag
atcgccgccctgagaacaacgcagcttgaggccttgacgacgacccaggcggcagcgctg
agctcaacgcagctttccgcgctcgggacggatgacatcgccacgttctcgagcgccgat
atagcggcgatcaccggcaaagccatagccggcctgagcacggccgtcatcgcagctctt
tcgaccgggcagatcgcagccttgagctccgccggcgtcgtcggtctgaccaccgaccag
atcgcctcgctgagcacggcgcaaattgccgccttgaccaccgctcgcgtaggggtgctg
cgcgcaacgcaagtcgccgccctgggaacggaagttgttgcatcgctttccaccgcacag
atcgcggctctgagcacggccggcatcgcgggtctgaccaccgaccagatcgataccctg
agcacggcacaggccgaggccttgacgacggctcaggtcgcagccctgagctcgacgcag
attgccgctctggagacggatgacatcgccactttctcgaccgccgatatcgcggcgatc
accagcaaggccataccgggcctgagtacggacatcattgccgctctctcgacggatcag
ctcgcggccctcggcacggccggcatagcaggcctgaccaccacacagatcgacgccatg
agcagcggtcaagttgcgaccctgctcaccaagcagattgcggcgttgagttcaacgcaa
gtcgcggccctcggtacggatattatcgcatctctttccaccgcgcagatcgccgccctg
agtgcggtcggtgtcgcgggtctgacgaccaaccagatcgccgccctcagcaccgcgcag
gccgagtccctgacaacggcccaggtcgccgtgctgagctcgacccagatcaacgccctg
ggcgccgatgacatagcgacattctcgacagcggatatcgcggcgatcaccagcaaggcc
atgtcgggtctaagcacgaccgttattgcaaccctctcgaccgatcaaatcgccgccttg
agcgcatccggcgttgcgggtctgaccaccagccagatcgctgccctgagcacggcgcaa
atcgccgccgtgaccaccgcacgggttgcggcgctgaattcaacccagattgctgtcttg
agcacagctgttatcgccgctctgtcgaccgcgcaggtcgccgcgctgagcacatccggc
attgcgggcctgaccacggaccagatcgtcgccctcagcacggcgcaggcggaggcattg
acgacgacgcaggtcgcagcgctgaattcaacccagattgctgctctggagacaggtgat
ttagcgactttctcgaccaaggatatcgcggcgatcggctcgagcgccatatcggggttg
tccacggcggttatagcgaccctctcgacggatcagatcgcggccctgagcacggccggc
attgccggtctctcgactgaacagatcaatgccctgagcacaggtcaaatcgacgccttg
ctgaccaagcaggtcgcggcgttgagttcgacgcaggtcgctgctctcagcacgggcctt
ctcgctgccctgtccaccacgcagattgccgccttgagcatctccggcattgccggcctt
tccaccaaacagattgccgccctcagcaccggccaggccgaggctttgacggccactcag
gtcggcgctctcagttccaaacaggttggagctttgagtacggcggacatagcgaccttc
tcgaccaaggacatcgcggccatcggttcgagcgtcatatcgggactatccacggctgtg
atagcaagcctctcgaccgcgcagatcgcggctttgagcgcagctggcattaccggcctt
tcaaccgctcagatcgtggccctgagcaccggccagctcgatgccttgaccaccgctcag
atcgcggctctcaattccacgcagcttgcggcgatggatgcggaggacatggcgacgttc
tcgaccaaggacatcgcggcgcttggttcgagtgccgtatcgggattgtccacggctgtc
atagcaaccctctcgacggatcagatcgcggccctgagcacggccggcattgccggtctt
tccaccaagcagattgtcgccctcagcaccggtcaggctgaggcattgacgacgatccaa
gtcggggcactcagttccacgcagcttgcagctctggacacggacgacatagccaccttc
tccaccgccgatatcgcggcgatcggctcaagcgccgtatcgggattgtctacggctgtc
atagccgctctctcgaccgggcaggtcgcggccttgagcacagccggcgttgtcggcttt
tccaccaagcagatcgccgccctgaacaccggccagatcgacgccttgctgaccaagcag
gttgcggtccttggttcgacgcaggtcgccgccctgaatacagctgttgttgcttccctt
tctaccgcgcaacttgccgcgctgagcacgtcagggatcaccggcctttccactgcgcag
atcgctaccctgggcacgggtcaggccgcggccctttcgacagcccagatcggcgcgctt
ggttccaagcaggttgctgccctgacgaccgccgacatcgcggctctctcgaccacgcag
atcgcggctctgagttcggttggcattgcgggtctgagcgccacgcagattgctgcattg
agcaccgaccaggccgaggccctcacaacgacgcaggtcgcggtgctgagctcgacccag
attgcggctctggggaaggaccaactcgagacgttctcgaccgccgacatcgcggcgatc
agctcgagtgcgataacgggattgtccacggatacgctggcggccttttcgacggcgcaa
atcgcggccctcggcacggccggcattgcgggcctttccaccacacagattgtggctctc
agcaccggccagcttgaggccttgacgaccgcccaggtcggtgcacttggttccaagcag
attgctgccttgacgactgccgacatcgcggccctgtcgaccacgcaagtcgcggccctg
agtacggccggcattgcgggcctgtcgaccgcgcagatcgcggctctgagtaccgatcag
gctgaggcgctgacgacgccccaggttgccgtactgaactcgacccaaattgcggccctg
gggacggaccaactcgagaccttctcgaccgccgacatcgcggcgatcagctcgagcgcc
atacagggattgtcgacgggcacgataacagcgctttcgacagaccagatcgccgtgttg
ggaacggccggcattgcgggcctgaccaccgcccagattggcgccttgagcaccgaccag
ctcgaagccctgaccaccgcccagattggcgcgcttggttccaagcagattgcagttctg
agcaccacaggcattgcgggcctgtcgaccgcgcagatcgcggccctgagcacctcgggg
attgccggcctgaccaccgaccagattgccgccttgagtaccaaccaggccgaggccctg
acaccgacccaggtcggtgcgctcagttccaagcagattgcggccctcggggcagacgat
cttgacacgttctcgaccgccgatatcgcggcgatcagttcgaccgccatatcgggattg
tccacggacacgatagcaggtctgtcgaccttgcagattgcggccctgggcacggccggc
attgcaggtctcaccactgcgcagatcgccgtattgagctctgaccaggttgacgccttg
acgacggcgcagatcagcgccctcagttccaagcagattgcaatcctgacgaccgccgat
atcgtggcgttttcgaccgccgatatcgcagccatcagctcggacgccatatcgggactg
cccacggccactattgccgccctgtcgactgtgcagattgccgccctgagcacggccggc
gttgcgggcctcaccaccgcacagatcgcagccctgaatgccgacaaggtcgaggcgctg
acgacggcgcagatcggtgcgcttagttccaagcaggttgccgtcctgagtgccgccgat
atcgcggccctgtcgactgcgcaggttgccgccctgagcacggctggcgtcgcaggcctg
agcagcgctcaggtcggcgcattgagcattgagcaggttgaagctctttccgccacccag
attgccgccttgacgtcgactggcgtcgcgggcctgaccacggctgacctggcaacattc
tcggccgccgatattgccgcgatcagctcaagtgccatacagggattgtccacggccttt
gtctcgtcgctttccacagccgagatcgccgctctgggcacgaccagcattgccggtctg
agcagcctccaggtcgcggccctcagcaccgagcagatcgaagcactgtccaccgcccag
attgccgctttgagttcggccggcttggcgggcctgagtgcggatgatctgggaactttc
tcgaccgccgaacttgtggcgatcagcgcgaattccataggaggattgtcgacggccttc
atcgccgcgctctccaaagaccagatcgccgtattgacaacgagccaagtcgcttcgctg
ggttacaaccaagtggcggccttgagcaccagccaaatcgccgccttgtcgacgtcgcag
cttggcgcgctcaacgcagtacagcttgccgggctggatgccgccgatctcgctaccttc
tcgaccgatagaattgttgccctgaattcgagcgcgatcgccggattgaccaccagcgcc
atcgccagcttgacgacggcgcaggccgaggctctgacttcgagccaggtcagcggtctg
acctcggcgcaggttgccgcactgaccacggaggagttggcgaccttctcgaccgacgat
atcgcatcgttcagttcaaccggcgtggcaggcttgtcgacgcaagatattgcgagcctg
tcgagcgaacaattgagcaccctgatgaaatcccagatgggacatctgagttcggaccag
atagcggcggttatttcgcgttacgtgggtgcctga
DBGET
integrated database retrieval system
