Rhizobium lusitanum: HB780_13700
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Entry
HB780_13700 CDS
T07787
Name
(GenBank) calcium-binding protein
KO
K21449
trimeric autotransporter adhesin
Organism
rls
Rhizobium lusitanum
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rls02000
]
HB780_13700
Transporters [BR:
rls02000
]
Other transporters
Pores ion channels [TC:
1
]
HB780_13700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
QND46654
LinkDB
All DBs
Position
p_1:2380372..2385675
Genome browser
AA seq
1767 aa
AA seq
DB search
MMECVGERLRFKSQAGFVGNWISGRSDSRSLRRRLMAVLRLAHRTLGTKRKGLGLGSLGI
GGAVALGTILFGGIATPALAQYAAGGGSTTSANAVAIGNGAKANNPNSVALGTSNSATGD
ASIAIGYSMGVNGLNAIGMGVFANATGVNALAVGGNARALADGASAYGVNSTANGANAVA
LGSTATASGGASVAIGLSSNASSSNGAAIAMGVGSKANAGTGGGSPVAIGTNANASGTAP
AGFTFEAVALGSAATATGAWANAVGSSASATGTGASAFGTSATASANQSTAIGNGAGASA
LRASAMGYLANASNTDTIALGTSAAASATNSVAIGPTTVASGAFGVALGNQAQTLAAGGG
VAIGSGAIVASTATSGVALGNNANAGGVLSVATGAGANASGGNSTATGRQAVASGTNASS
YGSGTQATGNNSLAAGVSANASGVGSTALGIGTVASAQSAIAVGNGAKADSADAVAIGTT
ATATGGKAVAIGAGNTAYGDGAVAIGDPSYASGTGAFTGGANNIANSDGTATATAANTAN
GAVAIGNNNKAIGQGSVALGNGSTAGASGFVGNVALGNGAAATASSGDVALGSGSVTAVA
VGTPNAVINGVTYSGFAGTTPGSTVSVGAVGAERTITNVAAGRINNGSTDAINGSQLYSV
TNTLSSQITASATHDYSVNSTTPGTDTNYNNAGATGANALAAGVSASAAGASSVAVGAGA
TARASSDTALGSGALAASLSNSPQTGAVAIGAGQATNDGAIAIGNAFGGGPKASGRDSIA
LGTAATAANAGDVALGSGSVTAVAVGTASTVINGITYSGFAGTTPGSTVSVGAVGAERTI
TNVAAGRINNGSTDAINGSQLYSVANTLSSQITASATHDYSVNSTTPGTDTNYNNAGATG
ANALAAGVSASAAGASSVAVGAGATARASSDTALGSGALAASLSNSPQTGAVAIGAGQAT
NDGAIAIGNAFGGGPKASGRDSIALGTAATAANAGDVALGSGSVTAAAVGTASTVIGTTT
YNFAGTTPSSTVSIGAVGAERTITNVAAGRLNNGSTDAINGSQLFATNQQVTQNTTDITS
INGNLTNLGNTINNIAGDTSTTYTDANGDGIRYVRTNDRTLPVSDSSAQGIGSTAVGYNA
TAGADSSLALGRESQATIDGGVALGSGSISDRALAPATGQIAAGPTNFIQYNTTDKTLLG
AVSVGSSTSYRQITNVADGTSAQDAVTVRQLQGAIASVATTPSKYFHANSAAGDSLAVGA
ESVAVGPTTVVNGDNGIGIGNGAIVDQVAPGGTAIGQNAHVLLADGIALGTNSTAAGIQS
VAIGAGAQSNNINSVALGAQSITSVGAQTNYTAFALTSPQTSVGEVSIGSAGSERKLTNL
AAGSADTDAVNVSQLKGIGTNVASLIGGNTTVNPDGSVTGPTYNIQGNNYSTVYDAFGAV
DSTLTNITSGGGIKYFHANSTLADSAASGTNSVAIGPESVASGTDSLAAGHGAAATGAGG
VALGQGAQANNANDVALGSGSVTQAAVGTSSTVIQGKTYDFAGTAPVGTVSVGAQGTERT
ITNVAAGRISADSTDAINGSQLNATNSAINDLQTGVGTITKNAVTYDLNSDGSKKNSITL
QGGDVNAPVVISNVGKGVAPTDAVNVAQLGDSITQANSYADTAVAGGLTAANNYTDQKFG
QLNREIGDVRSEARQAAAIGLAAASLRYDDRPGKLSVAVGGGLWRGESALAFGAGYTSEN
GRVRGNLSGTAAGGQVGVGAGLSFTLN
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatgcgttggggaacgtctgcggttcaagtctcaagccggatttgtcggaaat
tggatttcggggagaagcgacagtcgttcgcttcgtcggcggttaatggcggtgttgcgt
ctggcgcatcgcacgcttggcacgaagcgtaaggggttggggctcgggtcgctgggaatt
ggtggggcggtcgcactaggcacgatcttattcggcggcatcgccacgccggcgctggcg
cagtatgccgctggcggcgggtcaacgacctccgccaacgccgtcgccatcggtaacggt
gctaaagcgaataacccgaacagcgtggcgttgggcacctctaacagtgcaacgggcgat
gcttcgatcgccatcggctattcgatgggtgtcaatggccttaacgcaataggcatgggt
gtcttcgcgaacgcgactggcgtcaatgctcttgccgtgggcggaaacgcccgcgcactg
gcggacggagcatccgcctacggtgtcaacagcacggcaaacggggcgaacgctgtcgcc
ctcggctcaacggccaccgcttcgggtggcgcctcggtggcgattggattgtcctccaac
gcctcatcttcaaacggtgccgccattgccatgggggtcggctccaaagcaaacgccgga
acgggcggcggttctcccgttgctatcggtacaaatgccaatgcaagcggcaccgctcct
gccggcttcaccttcgaggctgttgcgttaggctcggctgcgacggccacgggtgcatgg
gcaaatgccgttggttcgagcgcatctgcgacggggactggagccagtgccttcggcacg
tcggcgactgcgtcggccaaccagtccacggcaatcggaaatggggcgggtgcttccgct
ctaagggcttcggccatgggctaccttgccaatgcctcgaacacggataccatcgccctc
ggtacgtcagccgcggcatcggcgaccaactcggtggccatcggccctaccaccgttgcg
tcgggagctttcggggtcgccttgggtaatcaggcacagacgcttgctgccggtggcggc
gttgcgataggttcgggcgcaattgtcgccagcaccgcgacctctggcgtcgcgctcggt
aacaatgcaaatgccggtggcgttttatcggtggccacgggcgcaggtgccaatgccagt
ggcggcaattccactgctacaggacgccaggctgtcgccagtggcacaaacgcctcctcg
tacggatctggaacgcaggcgacaggcaacaattctctcgctgccggcgttagcgccaac
gccagcggcgtcggcagcaccgcactcggcatcggcaccgtagccagtgcccaatcggcg
atcgccgtgggcaacggcgccaaggctgactcggccgatgccgttgccatcggcacgacc
gcgacggccacaggcggcaaggccgtcgcgatcggcgcgggcaacaccgcctacggtgac
ggcgcggttgcgatcggcgatccgagctatgccagtggcaccggcgccttcaccggcggt
gccaacaatatcgccaacagcgacggcacggcgaccgccacggccgccaacacagccaat
ggcgcggtcgccatcggcaacaacaacaaggcgatcggtcagggctccgtggcgctcggc
aacggctccaccgcaggtgcgagtggtttcgtcggcaatgtcgccctgggcaacggtgcg
gcggcgacagcgagctccggcgacgtcgcacttggttccggctcggtgactgccgtggca
gtcggcacgcccaatgcggtgatcaatggcgtcacctattcgggcttcgctggcaccacg
ccgggctcgacggtcagcgtcggcgcagtcggggcggaacggaccatcaccaacgtcgcg
gccgggcggatcaacaacggctcgacggatgcgatcaacggctcgcagctctacagcgtt
accaatacgctctcaagccagatcaccgcgagcgcgactcacgactatagcgtcaacagc
acgacgccgggaaccgataccaactacaacaacgccggggccaccggcgccaacgcgctc
gcggccggcgtcagtgcgagtgccgccggcgcgagcagtgttgcggtcggcgctggcgcc
acggcacgggcgtcatccgacacggcgctcggttcgggcgcgcttgccgcgtcgctcagc
aattcgccgcagaccggggcagttgccatcggtgcggggcaggccacgaatgatggtgcc
atcgcgatcggcaacgcctttggtggcggtccgaaggcatccggtcgtgattcgattgct
ctcggcaccgccgcgaccgccgccaatgcgggcgacgtcgcactcggttccggctcggtg
actgccgtagcagtcggcacggccagtaccgtgatcaatggcatcacctattcgggcttc
gctggcaccacgccgggctcgacggtcagcgtcggcgcggtcggggcggaacggaccatc
accaacgtcgcggccgggcggatcaacaacggctcgacggatgcgatcaacggctcgcag
ctctacagcgttgccaatacgctctcaagccagatcaccgcgagcgcgactcacgactat
agtgtcaacagcacgacgccgggaaccgataccaactacaacaacgccggggccaccggc
gccaacgcgctcgcggccggcgtcagtgcgagtgccgccggcgcgagcagtgttgcggtc
ggcgctggcgccacggcacgggcgtcatccgacacggcgctcggttcgggcgcgcttgcc
gcgtcgctcagcaattcgccgcagaccggggcggttgcgatcggtgcggggcaggccacg
aatgatggcgccatcgcgatcggcaacgcctttggcggcggtccgaaggcatccggtcgt
gattcgattgctctcggcaccgccgcgaccgccgccaatgcaggcgacgtcgcacttggt
tccggctcggtgactgccgctgcggtcggcacagccagcaccgtgatcggcaccactacc
tataatttcgccggtacgacaccctcctcgacagtgagtatcggagcggtgggcgctgaa
cgcaccatcaccaatgttgctgcaggccgtctcaacaacggttcgacggacgcgatcaac
ggatcgcagctctttgccaccaaccaacaagtgacgcagaacaccaccgacattacctcc
atcaacggcaatcttaccaatctcggcaatacgatcaacaacattgccggtgacacatcg
acgacctataccgacgccaatggcgatggcatccgatatgtgcgaaccaacgacaggacg
cttcccgtcagcgactcctccgctcagggcatcggctccaccgcagtcggctataatgcg
actgccggcgccgacagttcactcgcgcttggaagagaaagccaggccaccatcgatggc
ggcgtagcgctcggctcagggtcaatctccgatcgtgccctggcaccggccaccggccag
attgccgccggtccaacgaacttcatccaatacaatacgaccgataaaacgctgctgggc
gcagtatcggtcggctcgagcacgtcttaccggcaaatcaccaatgtcgctgacggcacc
agcgctcaggatgccgtcacggttcgccagttgcagggcgccatcgcttctgtcgcaacg
acgccgagcaaatacttccatgccaactctgccgctggcgattccctcgccgtcggcgcc
gagtcggtggcggtcggcccgacgacagtggtcaacggagataacggcatcggtatcggc
aatggcgcgatcgtcgatcaagtcgcgcccggcggcacggccatcggccagaatgctcat
gtcctgctggctgacggcattgcgctcggcacgaactcgacggcggcgggcattcaatcg
gtcgccatcggcgccggagcccagagcaacaacatcaatagcgttgcgctcggcgcgcaa
tccataacctccgtgggggcgcagacgaactataccgcctttgcccttacgagcccgcaa
acctcggtcggcgaagtgtcgatcggctcagccggatcggaacgcaagctgaccaatctc
gcagccggttccgcagacaccgacgccgtgaatgttagccagctaaaggggatcggcacc
aatgtcgccagcctgatcggtggcaacacgacggtaaatccggatgggtctgtcaccggt
ccgacctacaacatccagggcaacaattattcgaccgtttatgacgccttcggtgcggtc
gacagcacgctgaccaacatcaccagcggcggcggcatcaaatatttccatgccaactcg
acgctggcggattccgcagcttcgggcaccaacagcgttgcgattggtccagaaagtgtc
gccagcggtacggacagcctggctgccggtcatggagcagcggctacgggggcgggcggc
gttgctctcggtcagggcgcgcaggccaacaatgccaatgatgtggctttgggctccggt
tccgtaacacaggcggctgtcggcacctccagcaccgtcattcaaggcaagacctatgat
tttgccggcacagcgcccgtcggaaccgtgagtgtgggcgctcaggggaccgaaaggacc
atcacgaatgttgccgccggccgcatttccgccgacagcactgacgccatcaacggatcg
cagctgaacgcgaccaattcggcgatcaatgatctgcaaaccggcgttgggaccatcacc
aaaaacgccgttacgtatgatctcaattcggatggcagcaagaagaacagcatcaccctg
cagggcggtgacgtcaacgcgccggtggtcatctccaacgtcggcaagggggttgccccg
accgacgccgtcaatgtcgctcagttgggcgacagcatcacccaggccaattcctacgcg
gacacggctgttgccggtggcttgactgcggctaacaactatacggaccagaaattcggt
caattgaaccgggagattggcgacgtacggtcggaggcaaggcaggcggccgcaatcggg
ctcgccgcggcatcgcttcgttatgacgatcgtcccggcaagctcagtgttgcggtcggg
ggcggcttgtggcgaggtgaaagcgctctggccttcggcgccggttataccagcgaaaac
ggccgggttcgcgggaacctgtcgggtacggcagccggcggacaggtgggcgtcggtgcc
ggcctcagctttactttgaattga
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