Rhizobium lusitanum: HB780_14280
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Entry
HB780_14280 CDS
T07787
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rls
Rhizobium lusitanum
Pathway
rls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HB780_14280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rls03021
]
HB780_14280
03400 DNA repair and recombination proteins [BR:
rls03400
]
HB780_14280
Enzymes [BR:
rls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HB780_14280
Transcription machinery [BR:
rls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HB780_14280
DNA repair and recombination proteins [BR:
rls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HB780_14280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
QND46905
LinkDB
All DBs
Position
95220..96230
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPADRNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLSMSIETDGSITGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaaaaactggcaggaactgatcaagccgaacaaggtcgagttcacctcgagc
ggccgtaccaaggcaacgcttgtggccgaaccgctggagcgtggcttcggcctcaccctc
ggcaacgcgctgcgtcgcgttctgctgtcttctctgcgcggcgccgctgtgacggccgtg
cagatcgacggcgtactgcatgagttctcctctatcccgggcgtccgggaagatgtgacg
gacatcgtgctgaacatcaaggaaatcgccatcaagatggatggcgatgatgccaagcgc
atggttgtccgtaagcagggcccgggcgtcgtaacggctggcgatattcagacggtcggc
gatatcgaaatcctcaaccccgagcatgtcatctgcacgctcgacgagggtgccgaaatc
cgcatggaattcaccgtcaataacggcaagggctatgtcccggccgatcgtaatcgtgcg
gaagatgctccgatcggtcttatcccggtcgacagcctttattcgccggtcaagaaggtg
tcctacaaggtagaaaatacccgcgaaggacaggttctcgactacgacaagctgagcatg
tcgatcgaaaccgatggttcgatcaccggtgaagatgctgtcgctttcgcggctcgcatc
ctccaggatcagcttggcgtgttcgtcaacttcgacgagccgcagaaggaagccgaagaa
gaagcagttacagaacttgctttcaacccggcgctcctaaagaaggtggacgaactggaa
ctgtctgttcgctcggcaaattgcctgaagaacgacaacatcgtctatatcggcgacctc
attcagaagaccgaagcagagatgctccgcacgccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggtctgcacctcggcatggaagtgccggcatgg
ccgcctgagaacatcgaagatctcgccaagcgctacgaagaccaatactaa
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