Rhizobium lusitanum: HB780_16865
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Entry
HB780_16865 CDS
T07787
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rls
Rhizobium lusitanum
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rls01002
]
HB780_16865
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rls01011
]
HB780_16865
Peptidases and inhibitors [BR:
rls01002
]
Cysteine peptidases
Family C82
HB780_16865
Peptidoglycan biosynthesis and degradation proteins [BR:
rls01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HB780_16865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QND47372
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All DBs
Position
complement(613004..614905)
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AA seq
633 aa
AA seq
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MKLVTKAAASVLALSCCISAVGATSANAMTLMDFIRGGQGRQQSTQVSAPVPANPAQDTL
GSNPTPQVKGPLPKVDAPQYYTYKPEAMRLVASNRFADPVVTGAVADASATPVAVDSSAS
QRHHLTEVRVMATNDVAKAVESYYADQSKPLVWVADNTISEKAKAAMAVLADAASVGLDP
ADYAVTPPNFDQSSVDQEMRDRALMQFELTLSTKVLVFIQDTIRGRLDPNKISGYHDFKR
KDVNLMPVLGMLGASPDVAAYLNSRSPSNQQFMELKAELAKLKGASGGDGNNISVSLTGI
LKPGGSSPEMANIVKAIQHRGSDVLKTAHAATLDAYQGTPDYTPDLVALVEDFQKEKGLT
SDGVIGQSSVRAMVGENNNVKIQKLVVAMEQLRWLPNELGPRYVLINQPAFMVYYHNNNQ
EQLSMRVVVGGKQHQTFFFEDQIQTVEFNPFWGVPQSIIINEMLPKLRADPNYLDRMGYQ
VEVGGRAVASSSVDWYGSTKSVAVRQPPSSDNALGELKILFPNSHAIYMHDTPQKSFFKK
DMRALSHGCVRLADPRAMAAAVLNTTVADVAKQIAGGQNKAVAVPQKLPIYIAYFTAWPN
KDGVVQYFNDVYDRDAATLKALDATTKSRTAQI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgtcaccaaagccgcagcatccgtcctggctctttcctgctgcatctccgcc
gtcggcgcgacatccgcgaacgcgatgaccctcatggacttcattcgtggaggccagggg
cgtcagcagagcacgcaggtctccgctccggtccccgccaatccggctcaggatacccta
ggctccaacccgacgccgcaggtaaaagggccgctgccaaaggttgatgccccgcaatat
tatacctataagcccgaagccatgcggctggttgcatcgaaccgttttgcggatccggtg
gtaaccggggctgtcgccgatgcttcggccacgccggttgcggttgattcgagcgcttcg
cagcggcatcatctgaccgaagttcgcgtcatggcgacgaacgacgtcgccaaggcagtc
gagtcctattatgccgaccagagcaagccgctggtctgggttgccgacaataccatcagc
gagaaggcgaaggccgccatggcggttctggccgatgccgcctccgttggcctcgatccc
gccgactatgccgtgacgccgccgaatttcgaccagtcgagcgtcgatcaggagatgcgt
gaccgtgccctgatgcaattcgagctgacgctctccaccaaggtgctggtgttcattcag
gacacgatccgcggtcgtctcgacccaaacaagatctccggttatcacgacttcaagcgt
aaggacgtcaacctgatgccggtgcttggcatgttgggcgcaagcccggatgtcgccgcc
tatctcaatagccgcagtccttccaaccagcagttcatggagttgaaggccgagcttgca
aagctcaagggtgcaagcggcggcgatggcaataatatttccgtttcgctgaccggcatt
ctcaagccgggcggcagctcgcccgagatggccaatatcgtcaaggcgatccagcatcgc
ggttccgacgtgctgaagacggctcatgcagccacgctcgacgcctatcaggggacgccg
gattataccccggatctcgtggcgctggtcgaggacttccagaaagaaaagggcctgacg
tccgatggcgtcatcggccagtcttcggtccgcgccatggtcggcgaaaataataatgtg
aagatccagaagctggttgtcgccatggaacagctgcgctggctgccgaatgaactcgga
ccgcgctacgttctcatcaaccagccggccttcatggtctactaccacaacaataatcag
gagcagctgtcgatgcgtgtcgtcgtcggcggcaagcagcatcagaccttcttcttcgaa
gatcagatccagacggtcgagttcaacccgttctggggcgttccgcagtcgatcatcatc
aacgagatgctgccgaagctgcgtgccgacccgaactatctcgaccgcatgggctatcag
gttgaagtcggtggtcgtgctgtcgcttcgtccagtgtcgactggtacggctcgaccaag
agcgtcgccgtccgccagccgccgagcagcgacaatgcattgggcgagctgaagatcctc
ttcccgaactcgcatgcgatctacatgcatgacacgccgcagaagagcttcttcaagaag
gacatgcgtgccctcagccacggctgtgtccgccttgctgatccgcgcgccatggctgct
gccgtgctcaacaccacagttgcggatgttgcaaagcagattgccggcggccagaacaag
gccgttgccgtgccgcagaagttgccgatctatatcgcctacttcaccgcctggccgaac
aaggacggcgtcgtgcagtatttcaacgatgtctacgatcgcgacgcggcaacgctaaag
gcactcgacgcgacgaccaagtcccgcacggcgcagatctga
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