Rhizobium lusitanum: HB780_18815
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Entry
HB780_18815 CDS
T07787
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rls
Rhizobium lusitanum
Pathway
rls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HB780_18815 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rls03019
]
HB780_18815 (recQ)
03400 DNA repair and recombination proteins [BR:
rls03400
]
HB780_18815 (recQ)
Enzymes [BR:
rls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HB780_18815 (recQ)
Messenger RNA biogenesis [BR:
rls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HB780_18815 (recQ)
DNA repair and recombination proteins [BR:
rls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HB780_18815 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
GARS_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QND47724
LinkDB
All DBs
Position
complement(1021131..1023011)
Genome browser
AA seq
626 aa
AA seq
DB search
MSQPDRQEPRFSADDALFAERSSGMAPLDILKRVYGYPAFRGKQQQVVEHVVAGGDAVVL
FPTGAGKSLCFQIPALCRDGIGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEASD
IYRAVSSGTLDMLYVTPERILTDGFQQMIARAKIALFAIDEAHCVSQWGHDFRPEYRDLG
KLAELFPNVPRIALTATADPHTRDDIIERLGLDNAQVFTTSFDRPNIAYEIVERDQPRQQ
LLRFLDGHRGDSGIVYCLSRAKVEDTAEWLNGQGVRALAYHAGMDRSVRDANQDAFLKEE
DLCLVATVAFGMGIDKPNVRYVAHLDLPGSIEAYYQETGRAGRDGLPSEVWMAYGMADVI
QRGRMIDEGNAAPEIKRVERGKLNALLAVCETAGCRRQAILGHFGEAHAGGCGNCDTCLK
PVETWDGTEAAIKALAAVYRTGERFGTGHVIDVLMGTVNEKTERFGHVNMPVFGAGKDIP
SRTWQSVFRQLLANGFISVDHTAFGAMKLEPEAKAVFKHERQVFFRKDRPESGRRTKKGA
RMEKRESGLSGEAQPLFDALRAERTKIAKALGVPPYVVFPDTTLIAFATERPTSRDALLG
ISGVGQAKLERYGDAFLKVIKDFADR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagccggatagacaggaaccgcggttttccgccgacgatgcgctatttgcggag
cgcagttccggaatggcgccgctcgacatcctcaagcgggtctacggctacccggccttt
cgcggcaagcagcagcaggtggtcgagcatgtcgtggccggcggcgacgcggtggtgctg
tttccgaccggggctggcaagtcgctgtgcttccagattccggccctttgccgcgatggc
atcggcatcgtcgtctcgccgctgatcgccctgatgcgcgatcaggtcgaggcgatgaag
cagcttggtatccgcgcggcggcattgaattcatctttgtcgcgtgaggaagcgagcgat
atctatcgcgccgtctccagcggcacgctcgatatgctctatgtcacgcccgagcgcatc
ctgaccgatggattccagcagatgatcgccagggcgaagattgccctgttcgcgatcgat
gaggcgcattgcgtctcgcaatggggacatgatttccggccggaatatcgcgatctcggc
aagcttgcggaactctttcccaatgtgccgcgcatcgccctgacggcaacggcggatccg
catacgcgcgacgatatcatcgaaaggctggggctcgacaatgcccaggttttcaccacc
agcttcgatcgaccgaacattgcctatgagattgtcgagcgtgaccagccgcgccagcag
ttgttgcgctttctcgatggccatcgtggcgatagcggcattgtctattgcctgtcgcgg
gccaaggtcgaagatactgcggaatggctgaacgggcagggcgttcgcgcgcttgcctat
catgccggcatggaccgctcggttcgcgatgccaatcaggacgcatttttgaaggaagaa
gatctttgcctggtggcgacggtagccttcggcatgggtatcgacaagccgaatgtgcgc
tatgtcgcccatctcgatctgcctggctccatcgaggcctattatcaggagacaggccgc
gccggacgcgacgggctgccgtccgaggtctggatggcttacggcatggccgacgtcatc
cagcgggggcggatgattgatgagggcaacgcggcgccggagatcaagcgcgtcgagcgc
gggaagctcaatgcgctgcttgcggtctgcgaaacggctggctgccggcgacaggcgatc
cttgggcatttcggcgaggcgcatgctggcggctgcggcaattgcgatacatgcctgaag
ccggtcgagacctgggacgggacggaagcggcgatcaaggcgctggccgccgtctatcgc
accggcgagcgcttcggcaccggccatgtcatcgatgtgctgatgggcacggtcaacgaa
aagaccgagcgcttcggtcatgtcaacatgccggttttcggggccggcaaggatattccc
tcccgcacctggcaatccgtcttccggcaactgttggcaaacggcttcatcagcgtcgac
cataccgcctttggcgccatgaagctggagccggaggcaaaggccgtgttcaagcacgaa
cgtcaggtcttcttccgcaaggaccggccggaatcgggccgtcgcaccaagaagggtgcg
cggatggaaaaacgggaatcgggcctttccggcgaggcacagcctttgttcgacgctctg
agagcggagcgcacgaagatcgccaaggcgctcggagtgccgccctatgtcgttttcccg
gatacgaccttgattgcctttgcgacggaacggccgacgagccgcgacgctctgcttggg
atctcaggcgtcggacaggcgaagctggagcgctacggggatgcgtttttgaaggtcatc
aaggattttgccgaccggtga
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integrated database retrieval system
