Rhizobium lusitanum: HB780_24155
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Entry
HB780_24155 CDS
T07787
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rls
Rhizobium lusitanum
Pathway
rls02024
Quorum sensing
rls03060
Protein export
rls03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HB780_24155 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HB780_24155 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HB780_24155 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rls02044
]
HB780_24155 (ffh)
Enzymes [BR:
rls01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HB780_24155 (ffh)
Secretion system [BR:
rls02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HB780_24155 (ffh)
Eukaryotic Sec-SRP protein
HB780_24155 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_33
Zeta_toxin
AAA_30
AAA_22
AAA_31
AAA_19
AAA_25
ArsA_ATPase
DnaB_C
6PF2K
AAA_17
TctA
ResIII
APS_kinase
AAA_14
AAA_5
Thymidylate_kin
AAA
nSTAND3
NACHT
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QND48671
LinkDB
All DBs
Position
2122690..2124255
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AA seq
521 aa
AA seq
DB search
MFENLQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTDRVREKAV
GAGILKSIKPGQMVVKIVHDELIEMLGGEGVGIDLNAPAPVVVMMVGLQGSGKTTTSAKI
AHRLTSRDRKKVLMASLDTRRPAAQEQLRQLGVQAGIDTLPIIAGQSPTDIAARAVQAAK
LGGHDVVILDTAGRTHIDEPLMVEMADIKKRSNPHEILLVADSLTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMGELEEFHPRRIADRILGMGDI
VSLVEKAAENIDAEKAAAMAAKMAKGKFDLNDLADQLGQMQKMGGMGGIMGMMPGMSGMK
DKMAAAGLDDRLFKRQMAIISSMTKAERANPDLLKHSRKKRIASGSGTDASDINKLLKMH
RQMADMMKMMGGKGKGGMMKQMMGGLAGKMGLGGGMGGMPDLSNMDPKQLEALQKQAEAA
GLGRPGGMPGLGGGGLPGLGGAKLPGLGSGFPGLPGLPKKK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctccaggaccgtcttggttccattctgaatggactgacaggccgcggt
gcgctctcggaagccgatgtttccgcagcgctgcgcgaggttcgccgcgcgctgctggaa
gccgacgtggcgctggatgtcgtacgctcctttaccgaccgcgtccgcgaaaaggccgtc
ggcgccgggatcctgaaatcgatcaagcccggccagatggtcgtcaaaatcgtccatgac
gagctgatcgagatgctcggcggcgaaggtgtcggcatcgatctcaacgcgccggccccg
gtcgtcgtcatgatggtcggtctgcagggctcgggcaagaccaccacgtcagccaagatc
gcccaccgcctgaccagccgcgaccgcaagaaggtcctgatggcctcgctcgacacgcgc
cgtccggcagcacaggagcagttgcgccagctcggcgtccaggcgggtatcgacacgctg
ccgatcatcgccggccagtcgccgaccgatatcgccgcccgcgccgtgcaggctgccaag
ctcggcggccatgacgtcgtcatcctcgataccgccggccgtacgcatatcgacgagccg
ctcatggtcgagatggcggatatcaagaagcggtccaatccgcacgaaatcctgctggtc
gcggattcgctgaccggtcaggacgccgtcaacctcgcccgcaatttcgacgaacgcgtc
gggatcaccggcctcgtgctgacccgcatggacggcgacggccgcggcggtgccgctctt
tcgatgcgcgccgtcaccggcaagccgatcaagctgatcggcgtcggcgaaaagatgggc
gagctggaagaattccatccccgccgtatcgccgatcgtatccttggcatgggcgatatc
gtttcgctggtcgagaaggcagccgagaacatcgacgccgagaaggcagccgccatggcc
gccaagatggccaagggcaagttcgacctgaacgacctcgcagaccagctcggccagatg
cagaagatgggcggcatgggtggcatcatggggatgatgcccggcatgtccggcatgaag
gacaaaatggccgccgccggtctcgacgaccgcctgttcaagcgccagatggccatcatc
tcctcgatgaccaaggcagagcgcgccaatcccgacctgctcaagcattcccgcaagaag
cgtatcgctagcggctccggcaccgacgcctccgacatcaacaagcttctgaagatgcac
cgccagatggcggacatgatgaagatgatgggcggcaagggcaaaggcggcatgatgaag
cagatgatgggcggccttgccggcaagatgggtctgggcggcggcatgggtggcatgccc
gacctgtcgaacatggatcccaagcagctcgaagccctgcagaagcaggcagaggccgcc
ggtctcggccgtccaggcggcatgccgggccttggcggcggcggattgccaggtctgggc
ggcgccaagctgccgggcctcggtagtggtttccccggcctgcccggtttgccgaagaag
aagtga
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