Rhizobium lusitanum: HB780_26240
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Entry
HB780_26240 CDS
T07787
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rls
Rhizobium lusitanum
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rls03016
]
HB780_26240
Enzymes [BR:
rls01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HB780_26240
Transfer RNA biogenesis [BR:
rls03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HB780_26240
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QND49043
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All DBs
Position
2585652..2586278
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AA seq
208 aa
AA seq
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MAATIRYHEGDISVAAAARYTGAIAVDTETLGLVPRRDRLCVVQLSSGDGSADVIRIASG
QKQAPNLVAMLADPARQKIFHYGRFDIAVLFHTFGVTTTPVFCTKVASRLCRTYTDRHGL
KDNLKELLEVDISKTQQSSDWAAVKLSQAQLEYAASDVLYLHALSAKLTERLARDGRMEH
AEACFTFLPTRAKLDLLGWEETDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatccgctatcacgaaggcgatatttccgtggccgctgccgctcgctac
accggtgccatcgctgtcgacaccgaaacgctcggcctcgtcccccgccgtgaccggctc
tgtgtcgtgcagctttcgtcgggcgacggcagcgccgatgtgatccgcatcgcctcgggc
caaaagcaggcgcccaatttggtcgccatgctcgccgatcccgcccgccagaagatcttt
cactacggccgcttcgatatcgccgtgctgttccatacctttggcgtcaccaccacgccg
gtcttctgcaccaaggtcgcctcgcgcctctgccgcacctatacggaccgccatggcctg
aaggacaatctcaaggaacttctcgaggtcgatatttccaagacgcagcagtcctccgat
tgggccgccgtgaaactgtcgcaggcgcagctcgaatatgccgcctccgacgtgctctat
ctgcatgcgctgagcgccaagctgacggagcgccttgcgcgcgatggccgcatggaacat
gcggaagcctgcttcacctttctcccgacccgcgccaaactcgatctcctcggctgggaa
gagaccgatattttcgcgcatagctga
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