Rhizobium lusitanum: HB780_26760
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Entry
HB780_26760 CDS
T07787
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rls
Rhizobium lusitanum
Pathway
rls03030
DNA replication
rls03410
Base excision repair
rls03420
Nucleotide excision repair
rls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HB780_26760 (polA)
03410 Base excision repair
HB780_26760 (polA)
03420 Nucleotide excision repair
HB780_26760 (polA)
03440 Homologous recombination
HB780_26760 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rls03032
]
HB780_26760 (polA)
03400 DNA repair and recombination proteins [BR:
rls03400
]
HB780_26760 (polA)
Enzymes [BR:
rls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HB780_26760 (polA)
DNA replication proteins [BR:
rls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HB780_26760 (polA)
DNA repair and recombination proteins [BR:
rls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HB780_26760 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HB780_26760 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QND49128
LinkDB
All DBs
Position
2692736..2695738
Genome browser
AA seq
1000 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGVPVGAVSGFCNMLWKLLTSARDTSVGVT
PTHFAVIFDYSSKTFRKEIYDAYKANRSAPPEELIPQFGLIRQATRAFNLPCIETDGFEA
DDIIATYARQAEATGADVTIISSDKDLMQLVTSMVHMYDSMKDKQIGISDVIEKWGVPPE
KMIDLQALTGDSVDNVPGIPGIGPKTAALLLEEFGDLDTLLACAGEIKQEKRRENIIANA
DLARVSRQLVTLRTDVPLDLPLDALVLEPQDGPKLVGFLKAMEFTSLTRRVADACDCDPA
AIEPSDVKVEWGDTAHGPDLDAGDNAELVAGETVAAEGVSVPAPAVKPRVGVEGLTEPSD
LAKARAAGFATAPIDHSKYVTIRDVATLDRWIADARETGIVAFDTETTSLDVMQAEIVGF
SLAIADNKNDPTGASIRAAYVPLNHKNGVGDLLGGGLADNQIPLRDALPRLKALLEDTSV
LKIAQNLKYDYLLMKRYGIETKAFDDTMLLSYVLDGGANATHGMDSLSERWLGHKPIAYK
DVAGSGKSNITFDLVDIDRATAYAAEDADVTLRLWQVLKPRLAAEKLATVYERLERPLVP
VLAHMEERGITIDRQILSRLSGELAQGAARLEDEIYTLAGERFNIGSPKQLGDILFGKMG
LAGGSKTKTGQWSTSAQVLEDLAAAGLELPRKIVDWRQLTKLKSTYTDALPGYVHPQTKR
VHTSYSMASTTTGRLSSSEPNLQNIPVRTTEGRKIRTAFISTAGHKLISADYSQIELRVL
AHVANIPQLEQAFADGVDIHAMTASEMFGVPIEGMPSEVRRRAKAINFGIIYGISAFGLA
NQLSIERSEAGDYIKKYFERFPGIRDYMESTKATARDKGYVETIFGRRVHFPEIKSSNPS
VRAFNERASINAPIQGSAADVIRRAMIKMEPALSEAGLGDRVRMLLQVHDELIFEVEDAD
VERSTPVIVSVMENAAMPAVNMSVPLKVDARAANNWDEAH
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtgatcatctcttcctcgtcgacggctccggattcattttccgggccttc
catgccctaccgccgctgacgcgcaagtccgatggagtgccggtcggcgccgtctccggt
ttctgcaacatgttgtggaagcttttgacctcggcgcgcgatacttcggtcggcgtgacg
ccgacgcatttcgccgtcatcttcgactattcgtcgaagaccttccgcaaggaaatctac
gacgcctacaaggcaaaccgctcggcgccgccggaagagctgatcccgcaattcgggctc
attcgccaggcgacccgcgccttcaacctgccctgcatcgagactgacggcttcgaggcc
gacgatatcatcgccacctatgcccgccaggccgaggcgaccggtgccgatgtcaccatc
atctcctccgacaaggatctgatgcagctcgtcacctccatggtccacatgtatgacagc
atgaaagacaagcagatcggcatttccgacgtcatcgagaaatggggcgtgccgccggaa
aagatgatcgatctgcaggccctgaccggcgattcggtcgacaacgtgccgggcatcccg
ggcatcggcccgaagacggcagcgctgcttctggaggagtttggcgatctcgatacgctg
ctcgcctgcgccggcgagatcaagcaggagaagcgccgcgaaaacatcatcgccaacgcc
gatctggcccgggtttcccggcagctggtgacgctcagaaccgatgtgccgctggacctg
ccgctcgacgcgctggtgctcgagccgcaggacggcccgaaactggtcggcttcctgaag
gcgatggaattcacctcgctgacgcgccgcgttgcggacgcctgtgattgcgatccggca
gcgatcgagccgtccgacgtcaaggtcgagtggggcgacactgcccatggccctgatctc
gatgccggagacaatgccgagctcgttgccggtgaaactgtcgcggccgagggtgtttcc
gttcctgcgccggccgtcaagccgcgcgtaggtgtcgaggggctgaccgaaccgtccgac
ctcgccaaggcacgcgcggcaggctttgccaccgcaccgatcgaccattcgaaatatgtc
accatccgcgatgtcgccaccctcgaccggtggatcgcggatgcgcgtgaaaccggcatc
gtcgccttcgataccgagacgacgtcgcttgatgtcatgcaggccgaaatcgtcggcttt
tcgctggcgattgccgacaacaagaatgatcccacgggcgcttccatccgcgccgcctac
gtcccgctcaaccacaagaacggcgtcggcgacctgctcggtggtgggcttgccgacaat
cagatcccgctgcgcgatgccctgcctcgattgaaggcgctgctggaggacacttccgtc
ctcaagatcgcgcagaacctgaaatacgactatctgctgatgaagcgctacggcatcgag
accaaggccttcgacgacacgatgctgctttcctacgtgctcgatggcggcgccaacgcc
acgcatggcatggacagcctatcggagcgctggctcggccacaagccgatcgcctacaag
gacgtcgccggcagcggcaagtccaacatcaccttcgatctcgtcgatatcgaccgcgcc
acggcctatgccgccgaagacgccgacgtgacgctgcgcctctggcaggtgctgaagcca
cggctggcggccgaaaagcttgcgaccgtctatgagcgtctggagcggccgctggtgccg
gtcctcgcccatatggaagagcgagggatcaccatcgaccggcagatcctgtcgcgcctt
tccggcgaactggcgcagggcgccgcacggctggaagacgagatctatacgctggccggc
gagcgcttcaacatcggctcgcccaagcagctcggcgatattctctttggcaagatgggc
cttgccggaggcagcaagaccaagaccgggcaatggtcgacctcggcgcaggtgctggaa
gacctggcggcggccggcttggaattgccgcgcaagatcgtcgactggcgccagctcacc
aagctgaaatccacctataccgacgcgcttccgggttatgtccaccctcagaccaagcgc
gtccacacctcctattcgatggcctcgaccacgaccggacggctgtcctcctctgagccg
aacctgcagaatattccggttcgcacgaccgaaggccgcaagatccgcactgccttcatc
tcgacagcaggccacaagctgatctcggccgactacagccagatcgaactgcgcgtgctg
gcgcatgtcgccaatattccgcaactcgagcaggccttcgccgatggcgtcgatattcac
gccatgacggcctcggaaatgttcggcgtgccgatcgagggcatgccgagcgaagtgcgt
cgccgcgccaaggcgatcaacttcggcatcatctacggcatttccgccttcggccttgcc
aaccagctgtcgatcgagcgctcggaagccggcgactacatcaagaaatatttcgagcgc
ttccccggcattcgcgactacatggaaagcaccaaggcgactgcccgcgacaaaggctat
gtcgaaaccatcttcggccgccgcgtccattttccggaaattaagtcgtccaatccctcc
gtgcgcgcctttaacgaacgcgcctcgatcaatgcgccgatccagggctcggccgccgac
gtcatccgtcgtgccatgatcaagatggagccggcgctgtcggaggccggcctcggcgat
cgcgtccgcatgctgctgcaggtgcacgacgaattgatcttcgaagtcgaggacgccgat
gtcgagcgctcaacgccggtcatcgtctcggtcatggaaaacgccgccatgccggcggtc
aacatgtccgtgccgctgaaggtcgacgcgcgggcggcgaacaattgggatgaggcgcac
tga
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