Rhizobium lusitanum: HB780_28845
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Entry
HB780_28845 CDS
T07787
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
rls
Rhizobium lusitanum
Pathway
rls02024
Quorum sensing
rls03060
Protein export
rls03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HB780_28845 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HB780_28845 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HB780_28845 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rls02044
]
HB780_28845 (secD)
Secretion system [BR:
rls02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HB780_28845 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
SecD-TM1
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
QND49505
LinkDB
All DBs
Position
complement(3114129..3116687)
Genome browser
AA seq
852 aa
AA seq
DB search
MRTSRWLVALYSVIIVLGFLVALPNVLPQSTLSKIPNWLPHSQVPLGLDLRGGSYLVLEV
DEKDLTNGRLQSLQQDSRRVLRDKNILTRSIVRNGDQIVVTLTDPTQSGDAVTQLQTLAN
TITSGLSAGQSDLTIAPNGGAITMSFSRAGIAGNVDSAVQQSLEVIRKRVDQVGVAEPTI
QRVGPNRVLVQLPGAQDPSRLRQLLGSTAKMSFHLLADNVDPNNPGPGVTILKDEQGQSY
PVLDRIELSGDRLTDARVSFDPNTHEPLVTFRFDSAGANRFAEITRENVGKPFAIVLDNK
VLSAPNIREPITGGSGQISGNFTADSATTLAALLRAGALPAKLTVIEERTVGADLGADAI
QKGIYSGLVGFVLVAAFIFVLYGTWGVLANVALLIHTILTFSALTLVGATLTLPGIAGIV
LGIGLAVDANVLINERIREETRKGRTAFAAIDNGFRKAYSTIIDGNMTALIAAAILFYFG
SGPVRGFAVTMGLGLIISMFTSVAFVRVVMIAITRRRKLKVLNIRPLIPFSPYDKHIHFM
KARFFGVTVSAILSIASVVLFIHPGLNYGVDFRGGIQMSVKTKDAADLSTFREGLNTLGL
GEIALQSFGDNNSILVRAQRQDGGEEAQTAAVTKLKAEITKIDPAATIEGTDVIGPKVSG
ELAWAGILSVVIASLAMLAYIWVRFEWPFAVGAIVTLVLDVTKAIGFFAITGLDFNLTAI
AAILTLVGYSVNDKVVVYDRMRENMRLYKSMPLRDIIDKSINETLARSLYTNATAFLALV
PMAIWGGSAVSSFAIPMVFGILVAGASSIFIAAPILLFLGDWRRRHAKPAANDAAPADAK
AGKDNKQIPAAK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacttcacgatggctggtggcactctactcggtgatcatcgtgcttggctttctc
gttgccttgccgaacgtacttccgcagtcgaccctcagcaaaatcccaaactggctgccg
catagccaggtaccgctcggcctcgaccttcgcggcggctcctatctcgtcctcgaagtc
gatgagaaggatctgaccaatggccggctgcaatccttgcagcaggattcgcgccgcgtc
ctgcgcgacaagaacatcctgacccgctcgatcgtccgcaacggcgaccagatcgtggta
acgctcaccgatcccacgcagagcggcgatgcggtgacccagttgcagacgcttgccaac
acgatcacatccggtctttcggccggtcagtccgacctgacgatcgctcccaatggcggc
gcgatcaccatgtccttctcgagggccggcatcgccggcaacgtcgattccgccgtccag
cagagcctggaagtcatccgcaagcgcgtcgaccaggtgggcgtcgctgaaccgaccatc
cagcgtgtcggccccaaccgcgttctcgtgcagcttccgggcgcgcaggacccgtcgcgc
ctgcgccagcttctcggctcgaccgcgaagatgtccttccatctgctcgccgacaatgtc
gatccgaacaatcccggccccggcgtgaccatcctcaaggacgaacagggccagagctat
ccagtgctcgatcgcatcgagctatccggcgaccgtctgaccgacgcccgcgtcagcttc
gacccaaatacgcatgagccgctcgtcaccttccgcttcgacagcgccggcgccaatcgt
tttgcggaaatcacccgcgaaaatgtcggcaagcctttcgccatcgtgctcgacaacaag
gtgctgagcgcgccgaatatccgtgagccgatcaccggcggttcgggccagatctccggc
aacttcaccgccgatagcgcgaccacgctcgcagccctgctgcgcgccggcgcgctccct
gccaagctgacggtcatcgaagaacgcaccgtcggcgccgacctcggcgccgatgcgatc
cagaagggcatctacagcggcctggtgggcttcgtcctggttgccgccttcatcttcgtg
ctctacggcacctggggggtcctcgccaatgttgcactgctcatccacacgatcctgacc
ttctcggccctgacgctggtcggcgccacgctgacgctgcccggcatcgccggcatcgtc
ctcggtatcggccttgcggttgatgccaacgttctcatcaacgagcgtatccgcgaagaa
acccgcaagggccgcaccgccttcgccgccatcgataatggcttcaggaaggcttattcg
acgattatcgacggcaacatgacggccctgatcgcggccgccatcctattctactttggc
tccggcccggttcgcggctttgccgtcaccatgggtctcggcctcattatctcgatgttc
acctccgtcgccttcgtgcgcgtcgtgatgatcgccatcacccgtcgccgcaagctgaag
gtgctcaacatcaggccgctgatccccttcagcccctatgacaagcacattcacttcatg
aaggcccgcttctttggcgtcaccgtctcggcgatcctgtcgatcgcctcggtggtactg
ttcatccatccgggcctcaactacggcgtcgatttccgcggcggcatccagatgtcggtc
aagaccaaggacgcggccgacttgtcgacgttccgcgagggcctgaacacgctcggcctc
ggcgaaatcgcactgcagtccttcggcgacaacaacagcatccttgtccgcgcccagcgt
caggacggcggcgaagaggcgcagacagccgcggtgaccaagctcaaggcagaaatcacc
aagatcgacccggccgcgaccattgaaggcaccgatgtcatcggtccgaaggtctcgggc
gagcttgcctgggcgggtatcctgtcggtcgtgatcgccagcctggcgatgctcgcctac
atctgggtgcggttcgaatggccgttcgcggtcggcgccatcgtcacgctggtactcgac
gtcaccaaggcgatcggcttcttcgcgatcaccggcctcgatttcaacctgacggccatc
gccgcgattctgacgcttgtgggatattcagtgaacgacaaggtcgtggtctatgaccgc
atgcgtgaaaacatgcggctctataaatccatgccgctgcgcgacatcatcgacaagtcg
atcaacgagaccctggcgcgaagcctctataccaacgccaccgccttcctggcgctggtg
ccgatggcgatctggggcggcagcgccgtctccagcttcgcgatcccgatggtgttcggc
atacttgtcgccggcgcctcttcgatcttcatcgcagcgccgatcctgctgttcctcggc
gactggcgccgtcgccatgccaagcccgccgctaacgacgcggcaccggcagacgccaag
gccggcaaggacaacaagcagatcccggccgccaaataa
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