Rhizobium lusitanum: HB780_29685
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Entry
HB780_29685 CDS
T07787
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rls
Rhizobium lusitanum
Pathway
rls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HB780_29685 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rls03019
]
HB780_29685 (groL)
03110 Chaperones and folding catalysts [BR:
rls03110
]
HB780_29685 (groL)
03029 Mitochondrial biogenesis [BR:
rls03029
]
HB780_29685 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rls04147
]
HB780_29685 (groL)
Enzymes [BR:
rls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HB780_29685 (groL)
Messenger RNA biogenesis [BR:
rls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HB780_29685 (groL)
Chaperones and folding catalysts [BR:
rls03110
]
Heat shock proteins
HSP60 / Chaperonin
HB780_29685 (groL)
Mitochondrial biogenesis [BR:
rls03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HB780_29685 (groL)
Exosome [BR:
rls04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HB780_29685 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HB780_29685 (groL)
Exosomal proteins of breast cancer cells
HB780_29685 (groL)
Exosomal proteins of colorectal cancer cells
HB780_29685 (groL)
Exosomal proteins of bladder cancer cells
HB780_29685 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QND49659
LinkDB
All DBs
Position
complement(3285593..3287233)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFGRNAREKLLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVAEVVKDLQAKAKKINTSEEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDAYILLHEKKLSNLQAMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRTKKVSISKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEIEVKEKKDRIDDALNATRAAVQEGIVPGGGIALL
RSSTKITVKGENQDQEAGINIVRRALQALVRQIAENAGDEASIVVGKVLDKNEDNYGYNA
QTGVYGDMIAMGIVDPVKVVRTALQNAASVASLLITTEAMIAEVPKKDAPGGMPGGMGGM
GGMDMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtaaaattcggccgcaacgcccgcgaaaagttgcttcgtggcgtc
gatatcctcgccgacgcagtcaaggtaacgctcggcccgaagggtcgtaacgttgttatc
gacaagtccttcggcgctccgcgcatcaccaaggacggcgtcacggtcgccaaggaaatc
gaacttgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagttgcttcgaag
accaacgacatcgccggcgacggcacgacgactgcaaccgttctcgcccaggccatcgtt
cgcgaaggcgccaaggcagttgcagccggcatgaacccgatggacctgaagcgcggcatc
gatctcgctgttgctgaagtcgtcaaggatctccaggccaaggccaagaagatcaacact
tcggaagaagtcgcacaggtcggcacgatctccgcaaacggcgaaaagcagatcggtctc
gatattgctgaagccatgcagaaggtcggcaatgaaggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctc
agcccctacttcgtgaccaacccggaaaagatgatcgccgatctcgaagacgcgtacatc
cttctgcacgagaagaagctctcgaacctgcaggcaatgcttccggttctcgaagctgtc
gttcagaccggcaagccgctcctcatcatcgctgaagacgtcgaaggcgaagctcttgct
acgctcgtcgtcaacaagctgcgcggcggcctgaagattgctgccgtcaaggctccgggc
ttcggcgatcgccgtaaggccatgctggaagacatcgctatcctcacgggcggtactgtc
atctccgaagacctcggcatcaagctcgagtcggttacgctcgacatgctcggccgtacc
aagaaggtttcgatctccaaggaaaacaccacgatcgtcgacggcgccggacagaagtcc
gacatcgaaggccgtgttgcccagatcaaggcccagatcgaagaaaccacctctgactac
gaccgcgagaagctgcaggaacgtcttgccaagctcgctggcggcgttgccgttatccgc
gttggcggttcgacggaaatcgaagtcaaggaaaagaaggaccgtatcgacgacgctctg
aacgcgacgcgcgctgctgtccaggaaggcatcgtaccaggcggtggtatcgctctgctg
cgttcctccacgaagatcaccgtcaagggtgagaatcaggatcaggaagccggcatcaac
atcgttcgtcgtgcgctgcaggcgctggttcgccagatcgctgaaaacgctggtgacgaa
gcttcgatcgttgtcggcaaggttctcgacaagaacgaagacaactacggctacaacgct
cagacgggcgtctacggcgacatgatcgccatgggcatcgtcgacccggtcaaggttgtc
cgcacggctctgcagaacgcagcttcggttgcttcgctgctgatcaccaccgaagccatg
atcgccgaagtgccgaagaaggacgctcctggcggcatgcctggcggcatgggcggcatg
ggtggaatggacatgatgtga
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