Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_1283
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Entry
Rleg2_1283 CDS
T00779
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rlt
Rhizobium leguminosarum bv. trifolii WSM2304
Pathway
rlt03030
DNA replication
rlt03430
Mismatch repair
rlt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rleg2_1283
03430 Mismatch repair
Rleg2_1283
03440 Homologous recombination
Rleg2_1283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlt03032
]
Rleg2_1283
03400 DNA repair and recombination proteins [BR:
rlt03400
]
Rleg2_1283
Enzymes [BR:
rlt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rleg2_1283
DNA replication proteins [BR:
rlt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rleg2_1283
DNA repair and recombination proteins [BR:
rlt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rleg2_1283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
ACI54577
LinkDB
All DBs
Position
1301250..1304747
Genome browser
AA seq
1165 aa
AA seq
DB search
MADMAMGSTGEATGGTPGFIHLRVHSAYSLLEGALPLKKILYKATGDSQPAIAITDTNNL
FIALEFSQKAMDDGLQPIIGCQVSIDMEDGLETEKRGGQQALVKLPSIVLLAATDAGYER
LVDVVSRAYLGGESNQAIHIRASWLEEAGTEGLIALTGALTGPVDAAIKEGHPAQGEARL
LALKRLFGDRLYVELQRHGTYDKRHEQKIVGLAYAHDLPLVATNEAFFPTRDDYDAHDAL
MAVAHNAIVSDDSRFRLTPDHYLKSRAEMAKLFADLPEALENTIEIAKRCSFVLKTRKPI
LPRFTGATDDAEEAERAEASELRRQAVEGLDMRLATLGMSPGYEEMDYRERLDFELSVIE
RMRFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLN
PERVSMPDFDIDFCQDRREEVIRYVQAKYGREQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDKICKLVPNNPANPTPLSKAIEEEPKLQEEAAKEPVVARLLDIAQKIEGLYRHASTH
AAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKVAVDF
VAKRGINVDLAAIPLDDKLTYEMLSRGETVGVFQVESAGMRKALIGMKPDCIEDIIALVA
LYRPGPMENIPTYNARKHGDEELESIHPMIDHLLKETQGVIVYQEQVMQIAQVLSGYSLG
EADLLRRAMGKKIKAEMDQQRERFVVGAVKNGVSKPQADNIFELLAKFANYGFNKSHAAA
YAIVSYQTAYMKAHYPVEFLAASMTLDMSNTEKVNDFRQDAKRLGIEVIAPSVQTSFRHF
QTGDNRIYYALAALKGVGESAVDHIVEVRGDKPFAGIEDFCLRIDPRQVNRRVLESLIFA
GAFDCFGTDRAQLSAGLDRILGYAQRAQENKLSGQSDIFGSTLTSGPEKISLPPFSPWLA
SERLLKEFQVLGFYLTAHPLDSYANLLQKMRVQTFAEFSQAIKQGAFNARLAGTVISKQE
RKTRTGNKMGIIVFSDSSGQFEAVLFSEMLNQYRDVLESGKSFVLTATGEERPEGIGLRV
QTIQSLEEKSLQMQKALRVYVRDSGPLKMVAGHLNARGDGLVSFIVIKEEGKREVEVALA
EKYRITPEIAAALRAAPGVVDVELV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcggatatggcaatgggttcaacgggtgaggcgaccggcggtacgccgggcttcatc
cacctgagggtccactccgcctattcgcttctcgaaggcgccttgccgctgaagaagatc
ctttacaaggcgaccggcgacagccagccggcgatcgccatcaccgataccaacaatctg
ttcattgcgctggaattctcccagaaggcgatggacgacggcctgcagccgatcatcggc
tgccaggtctcgatcgacatggaagacgggttggaaacggaaaagcgcggcggccagcag
gcgctggtcaagctgccgtcgatcgttcttctcgccgccacggatgccggttacgaacgg
ctcgtcgatgtcgtcagccgcgcctatctcggcggtgaaagcaaccaggcgatccatatc
cgtgcctcgtggttggaggaggccggcacggaagggctgatcgccctgaccggcgcccta
accgggcctgtcgacgcggcgatcaaggaaggccatcccgcgcaaggggaagcccggctg
cttgcgctgaagcgtctcttcggcgaccggctctatgtcgaattgcagcggcacggcact
tacgacaaacgccacgagcagaagattgtcgggctcgcatatgcccatgacctgccgctc
gttgcgaccaacgaggctttctttccgacacgcgacgattacgacgctcatgacgcgctg
atggcggtcgcccacaatgccatcgtctccgacgacagccgctttcgcctcaccccggac
cattatctgaagagccgggccgagatggccaagctgtttgccgacttgccggaagcgctg
gaaaacacgatcgagatcgccaagcgatgctccttcgtgctgaagacgcgaaagccgatc
ctgccgcgcttcaccggcgcgaccgacgacgccgaggaggccgaacgcgccgaggcgagc
gagttgcgccgccaggctgtggaggggctggacatgcggcttgcaacgctcggcatgtcg
ccgggctacgaggaaatggattatcgcgagcggctggatttcgagctcagcgtcatcgag
cgcatgcgttttcccggttacttcctgatcgttgccgacttcatcaaatgggccaagcag
cacgacatcccggtcggtcccggccgcggttcgggcgccgggtcgcttgtcgcctacgcc
ttgacgatcaccgacgtcgatccgctgcggttttcgctgctcttcgaacgcttcctcaat
cccgaacgcgtctcgatgccggacttcgacatcgacttctgccaggaccgccgcgaagag
gtgatccgctatgtccaggccaagtatggccgcgaacaggtggcgcagatcatcaccttc
ggttcgctgcaggcgcgcgccgcccttcgcgacgtcggccgcgtgcttgagatgccctac
ggccaggtcgacaagatctgcaaactcgtgccgaacaatccggccaatccgacgccgctc
tccaaggcgatcgaggaggagccgaagctgcaggaggaggcggcgaaagagcctgtcgtc
gcgcgcctgctcgacattgcccagaagatcgaggggctttaccgccatgcctcgacgcat
gccgccggcatcgtcatcggcgatcgcccgctttccaagctggtgccgatgtatcgcgat
ccgcgctcggacatgccggtcactcagttcaacatgaaatgggtggagcaggccggcctc
gtcaagttcgacttccttggcctgaagacgctgaccgtcctgaaggtcgccgtcgatttc
gtcgccaaacgcggcataaatgtcgatctcgcggccattcctctcgatgacaaactgacc
tacgagatgctgtcgcgcggcgagacggtcggcgtgttccaggtggaaagtgccggcatg
cgcaaggcgctgatcggcatgaagccggactgcatcgaggatatcatcgcgctggtggcg
ctctaccgcccgggcccgatggagaatatcccgacctacaatgcccgcaagcacggcgac
gaagagctggaatcgatccatccgatgatcgatcacctgctcaaggaaacccaaggggtc
atcgtctatcaggagcaggtgatgcagatcgcccaggtcctgtccggttactcgcttgga
gaggccgatctgctgcgccgcgccatgggcaagaagatcaaggccgagatggaccagcag
cgcgaacgcttcgtcgtcggcgccgtcaagaacggcgtctcgaagccgcaggccgacaat
attttcgaactgctggcgaagttcgccaattacggcttcaacaagtcgcatgccgccgcc
tacgccatcgtctcctatcagacggcctatatgaaggcgcattatccggtcgaattcctc
gccgcctcgatgacgctcgacatgtccaacacggaaaaggtcaatgatttccgccaggat
gccaagcggctcggcatcgaggtgatcgccccttcggtgcagacctccttccgccatttc
cagaccggcgacaaccgcatctattacgcgctcgccgccctcaagggggtcggcgaatcc
gccgtcgaccatatcgtcgaggtgcgtggcgacaagccctttgccggcatcgaggatttc
tgcctgcgcatcgatccgcgccaggtcaaccgccgtgtgctcgaaagcctgatctttgcc
ggcgccttcgattgtttcggtaccgatcgcgcccagctgtcagccggcctcgaccgtatc
ctcggttatgcccagcgcgcccaggagaacaagctgagcggccagtcggatattttcggc
agcacgctgacctcggggcccgagaagatctccctgccgccgttttcgccctggcttgcc
tccgagcggctgctcaaggaattccaggtgctgggcttctatctcacagcccacccgctc
gattcctacgccaacctcctgcagaagatgcgggttcagacctttgccgagttttcccag
gcgatcaaacagggcgccttcaatgcgcgcctcgccggcaccgtcatttcgaagcaggag
cgcaagacccgcaccggcaacaagatgggcatcatcgtcttttccgattcctcgggccag
ttcgaggccgtgctgttttcggaaatgctgaaccagtatcgcgacgtgctggagtcggga
aaatccttcgtgctgaccgccaccggcgaggagcggccggagggcatcggcctgcgcgtc
cagacgatccagtcgctggaggaaaagtcgctgcagatgcagaaggcgctgcgcgtctat
gtcagagattccgggccgctgaagatggtcgccggccatctcaatgccaggggcgacggc
ctcgtttccttcatcgtcatcaaggaggagggcaaacgtgaggtggaagtcgcgctggct
gagaaataccgcatcacgccggagatcgccgccgctctccgcgccgcccccggcgtcgtc
gatgtcgagcttgtctga
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