Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_2563
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Entry
Rleg2_2563 CDS
T00779
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rlt
Rhizobium leguminosarum bv. trifolii WSM2304
Pathway
rlt03420
Nucleotide excision repair
rlt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rleg2_2563
03430 Mismatch repair
Rleg2_2563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlt03400
]
Rleg2_2563
Enzymes [BR:
rlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rleg2_2563
DNA repair and recombination proteins [BR:
rlt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rleg2_2563
MMR (mismatch excision repair)
Other MMR factors
Rleg2_2563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF4420
Motif
Other DBs
NCBI-ProteinID:
ACI55835
UniProt:
B5ZWG4
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All DBs
Position
2601260..2603737
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AA seq
825 aa
AA seq
DB search
MSNSFDDIPFFDEEPGEMARKPQPPAAPAGRAPATGGIAARAMAARDGGSRPDYLAGLNP
EQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKE
RIALLVGGAVEGMPWLGTFHSIGVKLLRRHGELVGLRSDFTILDTDDVVRLIKQLIQAEG
LDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGRGRDLYFAYQARLTTLNACDF
GDLLMHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRAKGEPQNVCC
VGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLG
KTLFTDRSDPEDVKVQVHASWDSEEEARAIGEEIEQLQRGKHLLNDMAILVRASFQMREF
EDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQASDDLAFERIINTPKRGLGDTTV
RALHDYARARDIPMLAAAADIIETDELKPKARKALFDVIQSFRRWQELLENTPHTELAEQ
ILEESGYTDMWKNDKSAEAPGRLENLKELIRSMESFESMRGFLEHVSLVMDAETNENLDA
VSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKHRCH
IWFVSNRRIHGLWQSTLPSRFLDELPETHVEVAEMEQSYGGYGRGGYGQSRFDKAEPFAN
SYSTPGWKRAQANKTDATRDNWGSRSGHAVERIGYGESGPKGRTIEGELVAKSTSSEPSR
FTLGDRVFHLKFGNGNITGIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagtttcgacgatattcccttcttcgacgaagagccgggcgagatggcgcgc
aagccgcagccgcctgccgcgcccgccggaagggcgcccgccaccggtggcattgccgcc
cgcgccatggcggcccgcgatggtggcagccggccggattatctcgccgggctgaacccc
gagcaaaccgaagccgtcgaaaccctggaaggcccggtcctcgtgcttgccggcgccggc
accggcaagacgcgcgtgctgacgacccgcattgcccatatcctcaataccggccgcgcc
ttcccctcacagatcctcgccgtcaccttcaccaacaaggcggcccgcgagatgaaggag
cgcatcgcgctgctggtcggcggcgccgtcgaaggcatgccctggctcggcaccttccac
tcgatcggcgtcaagcttctgcgccgccacggcgaactcgtcggcctgcgctccgatttc
accattcttgacaccgatgacgtcgtccgcctgatcaagcagctgatccaggccgaaggc
ctcgacgacaagcgctggccggccaagcagttcgccggcatgatcgacacctggaagaac
aaggggctcggtccggccgatatccccgagggcgacgcccgcgcctttgccaacggccgc
ggccgcgacctttatttcgcctatcaggcgcgcctgacgacgctgaacgcctgcgacttc
ggcgacctgctgatgcatccgatcgcgatcttccgcaagaacccggatcttctgaaggaa
tatcacggccgcttccgctatatcctcgtcgacgagtaccaggacaccaacaccgctcaa
tatatgtggctccggctcctcgcccagcgcgccaaaggcgagccgcagaacgtctgctgc
gtcggcgacgacgaccagtcgatttatggctggcgcggcgccgaggtcgacaatatcctg
cgcttcgaaaaggatttcccaggcgccaaggtcatcaagctcgagcgtaattaccgctcg
accgaacatatcctcggtgccgctgcccacctgatcgcccataatgaagggcggcttggc
aagacgctgttcaccgaccgctccgatcctgaagacgttaaggtgcaggtgcacgcctcc
tgggattcggaggaggaagcccgcgccatcggcgaggagatcgagcagcttcagcgcggc
aagcatctgctcaacgacatggcgatcctcgtgcgcgcctccttccagatgcgcgaattc
gaagaccgcttcgtcacccttggcctcaactaccgcgtcatcggcggcccgcgcttctac
gagcgcctggaaatccgcgatgccatggcctatttccgcctggtcgctcaagcctccgac
gacctcgccttcgagcgcatcatcaacacgccgaagcgcggcctcggcgacacgacggtg
cgcgcgctgcatgactatgcgagagcccgcgatatcccgatgctggcggccgccgccgac
atcatcgaaacggatgagctgaagccgaaggcgcgaaaagccctcttcgacgtgattcaa
tctttccgccgatggcaggaactgcttgaaaacacaccgcataccgaacttgccgagcag
atcctcgaagagtccggctataccgatatgtggaagaacgacaagagcgccgaagcgccc
ggccgccttgagaacctcaaggaactgatccgctcgatggaaagcttcgagtcgatgcgt
ggctttctcgaacacgtctctctcgtcatggatgccgagaccaacgagaacctcgatgcc
gtctcgatcatgacgctgcattcggccaagggcctggagttcgacaccgtcttcctgccc
ggctgggaggaaggcctctttccgcatcagcgctcgctcgatgaaagcggccgcgccggc
ctggaggaggaacgtcggctcgcctatgtcggcatcacccgcgccaagcaccgctgccac
atctggttcgtctccaaccgccgcatccatgggctatggcaatcgaccctgccctcgcgt
ttcctcgacgagctgccggaaacccatgtcgaggtcgccgaaatggaacagagctatggt
ggctacggccgcggcggctacggccagtcccgcttcgacaaggccgagccttttgccaat
tcctattccacccccggctggaaacgtgcccaggccaacaagaccgatgccacgcgcgac
aattggggttcccgctccggccacgccgtcgaacgcatcggctatggcgaaagcggcccg
aagggacggacgatcgaaggcgaactggtggcaaaatccacctcgtcggagccttcacgc
ttcacgcttggcgaccgcgtgttccatctgaaattcggcaacggcaacatcaccggcatc
gaaggcaacaagctgacgatcgagttcgaccgggccgggcagaagcgggtgctggacggg
ttcgtcgagcgcgtgtga
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