Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_2702
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Entry
Rleg2_2702 CDS
T00779
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rlt
Rhizobium leguminosarum bv. trifolii WSM2304
Pathway
rlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rleg2_2702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlt03019
]
Rleg2_2702
03400 DNA repair and recombination proteins [BR:
rlt03400
]
Rleg2_2702
Enzymes [BR:
rlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rleg2_2702
Messenger RNA biogenesis [BR:
rlt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Rleg2_2702
DNA repair and recombination proteins [BR:
rlt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Rleg2_2702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
GARS_N
HTH_35
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
ACI55973
UniProt:
A0ABF7QNZ7
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All DBs
Position
complement(2740886..2742751)
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AA seq
621 aa
AA seq
DB search
MPQTERNEPGFSASDALFSAGRAPLDILKQVYGYSSFRGKQQLVVDHVVSGGDAVVLFPT
GAGKSLCFQIPALCRDGVGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEFVEVRR
ALSAGRLDLLYVTPERILTDGFRELIANEKIALFAIDEAHCVSQWGHDFRPEYRALGQLG
EQYPGVPRVALTATADPHTRDDIIERLGLDAAEIFTTSFDRPNIAYEIVERDQPRQQLLR
FLSGHKGNSGIVYCLSRAKVEDTAEWLNGQGVRALAYHAGMDRAVRDANQDAFLKEENLC
LVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRG
RMIDEGSAAAEIKRVERAKLNALLAICETASCRRQAILAHFGEAHAGQCGNCDTCLKPVE
TWEGTEAAIKALAAIYRTGERFGAGHVIDVLVGNVNEKTERFGHVDMPVFGAGKDIPSRT
WQSVYRQLLAMGLIRVDHEAYGALKLEPEARAVFKQERQVFFRKDRPASERRTKKAERSE
RKSGLSGADGTLFDALRAERMAIAKSLGVPPYVVFPDTTLIAFATERPRSRKELLAISGV
GQAKLERYGDAFLEIILAQDG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagaccgaacggaacgaaccgggtttttccgcctccgacgcgctgttttccgcc
ggccgcgcgccgctcgatattctcaagcaggtctatggctattcctccttccgcggcaag
cagcagctggtggtcgaccatgtggtatcaggcggcgatgccgtggtgctcttcccgaca
ggcgcgggcaaatcgctgtgcttccaaatcccggcgctctgccgcgatggcgtcggcatt
gtcgtttcgccgctgattgccttgatgcgcgatcaggtcgaggcgatgaagcagctcggc
atccgtgccgccgcgctcaattcgtcgctgtcgcgcgaagaattcgtcgaagtccgccgc
gcgctttcggccggccggctcgatctgctctacgtcacacccgagcgcattctgaccgat
ggtttccgcgagctgatcgccaacgagaagattgcgctgtttgccatcgacgaggcgcat
tgcgtttcgcaatggggtcatgatttccggccggaatatcgcgcgctcggccagcttggc
gaacaatatcccggcgtgccgagggtggcgctgacggcgacggccgatccgcatacgcgc
gacgacatcatcgagcggctggggctcgacgctgccgagatcttcaccaccagcttcgac
cggccgaacatcgcttacgaaatcgtcgagcgcgaccagccgcgccagcagctgttgcga
ttcctgtccggccacaagggaaacagcggcatcgtctattgcctgtcgcgcgccaaggtc
gaggatacggcggagtggttgaacgggcagggcgtgcgcgcgcttgcctatcatgccggc
atggaccgggcggttcgcgacgccaatcaggatgcgttcctgaaagaggaaaacctctgc
ctggtcgccaccgtcgccttcggcatgggcatcgacaagccgaatgtgcggtatgtcgcc
catctcgacctgccgggctcggtcgaggcctattatcaggagaccgggcgcgccggccgt
gacggactgccgtccgaagtctggatggcctatggcatggccgacgtcatccagcgcggc
cggatgatcgacgagggcagtgctgctgcggagatcaagcgggtcgagcgcgccaagctc
aatgcattgctggcgatctgcgagaccgcctcctgccgccgccaggcgatccttgcgcat
ttcggcgaggcgcatgccggacaatgcggcaattgcgacacctgcctgaagccggtcgaa
acctgggagggcacggaagcggcgatcaaggcgctggccgcaatctaccgcaccggcgaa
cgtttcggcgccggccacgtcatcgacgtgcttgtcggcaacgtcaacgaaaagaccgag
cgtttcggccatgtcgatatgccggtcttcggcgccggcaaggatattccatcgcgcacc
tggcaatccgtctaccgccagctgcttgccatggggctgatccgtgtcgatcacgaagcc
tatggcgcgctgaagctggagccggaggcgcgcgccgtcttcaagcaagagcggcaggtt
ttcttccgcaaggaccgcccggcctccgaacggcgcacgaagaaggctgaacgcagcgag
cgcaaatcaggattgtcaggcgccgacggcactctcttcgacgcgctgcgggccgagcgc
atggcgatcgccaaatcgctcggcgtgccgccctatgtggtctttcccgatacgacgctg
atcgcttttgccactgaacggccgcgcagccgcaaggaattgcttgccatatcgggtgtc
ggccaggcgaagctcgagcgctatggcgatgcgttcctggaaatcatcctggcgcaggac
ggctga
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