KEGG   Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_3932
Entry
Rleg2_3932        CDS       T00779                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rlt  Rhizobium leguminosarum bv. trifolii WSM2304
Pathway
rlt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rlt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rleg2_3932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rlt03021]
    Rleg2_3932
   03019 Messenger RNA biogenesis [BR:rlt03019]
    Rleg2_3932
Transcription machinery [BR:rlt03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Rleg2_3932
Messenger RNA biogenesis [BR:rlt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Rleg2_3932
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 NACHT S1CSD-TOTE-2 DUF6360 AAA
Other DBs
NCBI-ProteinID: ACI57194
UniProt: A0ABF7QSD5
LinkDB
Position
complement(4082834..4084099)
AA seq 421 aa
MAEMKLQELKSKSPTDLLAFAESLEVENASTMRKQELMFAILKMLASQDVEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELEIPTSKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKNNSDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaggaacttaaaagcaaatccccgacggatcttctggctttc
gccgaatcgctcgaggtcgaaaatgccagcacgatgcgcaagcaggagctgatgtttgcg
atcctcaaaatgcttgccagccaggatgtcgaaattatcggcgaaggggtcgtcgaggtt
ctgcaggatggtttcggttttctgcgttcggccaatgcaaactacctgccgggtccggac
gatatctatatctccccctcgcagattcgccggttctcgctcaaaacaggcgatacggtc
gaagggccgatccggggacccaaagaaggcgagcgctatttcgcgctgctgaaagtcaac
accatcaatttcgacgatccggaaaagatccgtcacaaggttcatttcgacaatctgacg
ccgctctatccgaacgagcgtttcaagatggaactcgagatccccacttccaaggatctg
tcgccgcgcgtcatcgacctggtggcgccgctcggcaagggccagcgcggactgatcgtc
gcgccgccgcgcaccggtaagaccgtgctgctgcagaatatcgcccattcgatcacggca
aaccatccggaatgctatctcatcgttcttctgatcgatgaacgccccgaggaagtgacc
gacatgcagcgttccgtccgcggcgaggtcatctcctcgaccttcgatgaaccggccgtg
cgccacgtccaggtggcggagatggtcatcgaaaaggcgaagcgccttgtcgagcatggc
cgcgacgtcgttatcctgctcgattcgatcacccgtctcggccgtgcctacaacaccgtc
gttccctcctcaggcaaggtcctgaccggcggtgtcgacgccaacgccctgcagcggccg
aagcgtttcttcggtgctgcccgcaacatcgaggaaggcggttcgctgacgattatcgcc
accgcgctgatcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggt
accggcaactccgaaatcgtcctcgatcgcaaggtcgccgacaagcgtatcttcccggcg
atggacattctgaagtccggcacgcgtaaggaagatctgctcgttccgcgccaggatctg
cagaagatcttcgtcctccgccgcattctggccccgatgggcacgaccgatgcaatcgaa
ttcctcatcgacaagctgaagcagacgaagaacaattccgacttcttcgactcgatgaat
acataa

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