Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_4028
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Entry
Rleg2_4028 CDS
T00779
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rlt
Rhizobium leguminosarum bv. trifolii WSM2304
Brite
KEGG Orthology (KO) [BR:
rlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlt03016
]
Rleg2_4028
Enzymes [BR:
rlt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Rleg2_4028
Transfer RNA biogenesis [BR:
rlt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Rleg2_4028
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACI57290
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All DBs
Position
4201442..4202068
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AA seq
208 aa
AA seq
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MAATIRYHEGDISAADAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADVIRIASG
QKEAPNLVALLEDPTHQKIFHYGRFDIAVLFHTFGVTTNPVFCTKIASRLIRTYTDRHGL
KDNLKEMLDVDISKAQQSSDWAAETLSPAQLEYAASDVLYLHALRDKLTERLLRDGRFDH
ATACFAFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatacgttatcacgaaggcgatatttccgcagccgatgccgcgcgttac
accggcgcgattgccatcgacaccgaaacgctcggcctggtgccgcgccgggaccggctc
tgcgtcgtccagctttcaccgggtgacggcaccgccgacgtcatccgcatcgcctccggc
cagaaagaggctcccaatctcgtcgccctgctcgaagatccgacccatcagaagatcttt
cattacggccgcttcgatattgccgtgctcttccacacattcggggtcacgacgaacccg
gtcttctgcaccaagatcgcctcgcgcctgatccgcacctatacggatcgccacggcctc
aaggacaatctcaaggagatgctcgacgtcgatatctccaaggcgcagcagtcttccgat
tgggcggccgagacgctgtctccggcccagctcgaatatgccgcttccgatgtgctttat
ctgcacgcgttgcgcgacaagctgacggaacgcctgctccgcgacggccgcttcgaccat
gcgacggcctgcttcgcattcctgccgacccgcgccaagctcgacctgctcggctgggaa
gaggccgatatcttcgcccatagctga
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