Rhizobium leguminosarum bv. trifolii WSM2304: Rleg2_5028
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Entry
Rleg2_5028 CDS
T00779
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
rlt
Rhizobium leguminosarum bv. trifolii WSM2304
Pathway
rlt02020
Two-component system
rlt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rlt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rleg2_5028
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Rleg2_5028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlt03021
]
Rleg2_5028
Transcription machinery [BR:
rlt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rleg2_5028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ACI58250
UniProt:
A0ABF7QVQ5
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All DBs
Position
pRLG201:675154..676740
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AA seq
528 aa
AA seq
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MPLSANLSLHQTQSLVMTPRLVESIKLLRMNHHELSQFISQKAEENPLLEISSDEVEGDE
WGACGDDPLNPSPDDAADSGSHNREEALSSDWYDDVGCAGTTRLNGELDDKYSNVYEDCG
SSDLDAPGSDDQRQSGSSGKGPDYYLSRHVAGPTTLGHHLAQQIPFVLPDKVDRLIAQYL
VDRLDDAGYLQVELIEVAERLGTSLTAAERVLSALQTLDPPGVFARSLSECLELQLRQKD
RCDPAMQTLIENLELLARRDFATLKRLCGVDEEDLLDMLGDIQELNPKPGLGFGRRAGDT
LPDVIVRRSLEGGWLVNLNPNTLPRVLVNQSYFSQVTKGGEVYAFLAECLRDAEWLTRSL
NQRANTIMKVANEIVRQQDAFLLNGVDHLRPLNLKTVAQAIDRSESTVSRVTSDKYMLTP
RGLFELKYFFTVSISAVAGGDSHSAEAVRHKIRAVIMQESPDAVLSDDDIVDMLKKGGVD
LARRTVAKYRQAMNIASSVQRGREKRARANSPVREDSSMVFPSKTQSE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtccgccaatctatcactgcatcagacgcaatcccttgtcatgacaccgcga
ctagtagagtcgatcaagttgctgcgaatgaatcatcacgaactcagccagttcatttct
cagaaagcggaggagaatcccctcctcgaaatttcgtcggatgaggtcgaaggcgacgag
tggggggcatgcggcgacgacccgctcaatccctcgccggatgacgccgctgatagcggc
tcccacaatcgtgaggaggcgctgtcgagcgactggtacgatgatgtcggctgcgccggc
accactcggctgaacggtgagctcgacgacaagtattccaacgtctacgaggattgtggc
tcaagcgaccttgatgcgcctggatccgacgaccagcggcaatcgggtagcagtggaaag
ggccccgattactatctcagtagacatgtcgctggacccacgacgttgggccatcatctc
gcccagcaaatccccttcgtcctgcccgacaaggtcgatcggctgattgcgcagtactta
gtcgatcggctcgacgatgccggttacctgcaggtcgaactcatcgaggtcgccgagcgg
ctgggcacgagtctgactgcggccgagcgtgtgctttccgccctgcagacgctcgatcca
ccgggagttttcgcccgcagcctttcggagtgcctagagctccagctcaggcagaaggat
cggtgcgaccccgccatgcagacgctgatcgaaaacctcgaactgctggcacggcgcgac
tttgctacactgaagcggctctgcggcgtcgacgaggaagaccttctcgacatgcttggc
gatatccaggagctcaatcccaagcccggcctcggtttcggacgcagggctggtgacaca
ttgcctgacgtgattgtccgacgctctttagaaggtggctggctggtcaatctcaatccg
aataccctgccgcgcgtgttggtcaaccagtcctatttttcccaggtgaccaagggcggc
gaggtttacgcattccttgccgagtgccttcgggacgccgagtggctaacgcgcagcctc
aaccagcgggcaaacacgatcatgaaggtggcaaacgagattgtccgccagcaggacgcc
ttcctgctgaacggtgttgaccacctgcgcccgttgaatctgaaaacggtggcacaggca
atcgacaggagcgaatccaccgtcagccgcgttacctcggacaaatatatgctgacgccg
cgcggcctcttcgagctgaaatatttcttcaccgtctcgatcagcgcggttgctggcggc
gacagccattcagccgaggcggtgcgtcacaagatccgcgcggtgatcatgcaggagagc
ccggacgcggtgctctccgacgacgacatcgtagacatgctgaagaagggtggcgtcgat
ctcgcccgccgcacggtggccaaataccgccaggctatgaacatcgcctcctcggttcag
cgcggtcgcgaaaaacgggcacgcgcaaactcgccggttcgtgaggactcttcaatggta
ttcccctcgaaaacgcaaagcgagtga
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