Rhizobium leguminosarum bv. trifolii CB782: RLEG12_00280
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Entry
RLEG12_00280 CDS
T03015
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
rlu
Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu02020
Two-component system
rlu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rlu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RLEG12_00280
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RLEG12_00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlu03021
]
RLEG12_00280
Transcription machinery [BR:
rlu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RLEG12_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LTI65_PGEED
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
AHG50069
LinkDB
All DBs
Position
unnamed3:complement(48011..49624)
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AA seq
537 aa
AA seq
DB search
MTTSNKLILGLRQSLAMNPDLIESINLLQMSQIEIKQFTILEAESNPLLDLVSNDGEVGD
EWTAGDDEQYGPPPEDAGADNRDEALSSEWYDNGGSASTSRLNEELDANYANVFPDDCDP
QRLELASERKSMPGSVSGADYDLEDFAAAQVSLHDEIAQQIPFLKHDISDRAIAKDFVEQ
LDDCGYLPADVVEASERRGTSRAQAERVLAALQTLDPPGVFARSLSECLAIQLRQKDRYD
PAMQALVENLELLARRDFAMLKRLCGVDEEDLLDMVGEIHQLDSKPGIRFEASATIGIVP
DVVVRANAKGGWMVDPNPDTLPRVRVNRSYSSQVTKSVSVHDYLAERLQRADWVKRSLDQ
RAKTIMKVANEIVRQQDAFLRHGVEHLRPLMRKTVAEAIDMDESTVSRVTSNKYMLTPRG
LHEFNYFFTVAIPAIGGGDTHSAEAVRHKIRALILQESSKAVLSDDDIVDMLKKDGVDLA
RRTVAKYREGMNIASSFKRRREKRVLANVESRGDAQGVHSARPLSGDRGAGRVTNDQ
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctctaacaaactgatccttggcctgcgtcagtcactggcgatgaacccggac
ctcatagaatcaataaacttactgcagatgtcgcaaattgagatcaaacagttcaccatc
ctcgaagccgagagcaaccctctgctcgacttggtctcaaatgacggcgaggtgggcgat
gagtggacggctggcgacgacgaacagtatggccctcctcccgaggatgccggcgcggac
aatcgcgacgaggcgctgtcgagcgagtggtacgacaatggaggcagcgccagcacaagt
cgactgaacgaggaactcgacgccaactacgccaacgtctttcctgacgattgtgacccg
cagcgcctcgagctcgccagcgagcggaaatccatgccaggcagtgtctcgggggccgac
tacgatctcgaagatttcgccgccgcgcaagtgtcgctgcacgatgagatcgctcagcag
atccccttcctcaagcacgatattagcgaccgggcgatcgcgaaggattttgtagagcag
ctcgacgactgcggttacctgccggccgatgtcgtcgaggcgagcgaaaggcggggtacg
agccgcgcacaggccgagcgtgtgctggccgccctgcagacgctcgatccgccgggggtt
ttcgcccgcagcctctcggaatgcctggcgatccagctcaggcagaaggaccgttacgac
ccggccatgcaggcgctcgtcgaaaacctcgaactgctggcgcggcgtgatttcgccatg
ttgaagaggctttgcggcgtggacgaggaggatctactagacatggtcggtgagatccac
cagcttgattccaagcccgggatccgcttcgaggcgagtgcgaccatagggatcgtcccg
gatgtggtcgtcagagccaacgcaaagggcggttggatggtcgatcccaatccggatacg
ctaccgagagtccgggtcaaccgttcgtattcttcccaggttaccaagagtgtctcagtt
catgactacctcgccgagcgcttgcagagggccgactgggtcaagcggagcctcgaccag
cgggcaaagacaatcatgaaggtggcaaacgaaatcgtccgccagcaggacgcgttccta
cggcacggcgtcgagcacctgcgcccgctgatgcggaagacggtcgccgaagcgattgat
atggatgaatcgactgtcagtcgcgtcacgtccaacaaatatatgctcacgccgcgcggc
ctccacgaattcaattatttcttcaccgtcgcaatcccggcgatcgggggcggcgacacc
cattcggccgaggcggtgcgtcataagatccgtgcgctgatcctgcaggagagctcaaag
gcggtgctttccgatgacgatatcgtggacatgctgaagaaggacggtgtcgatctcgcc
cgccgcacggttgcgaaatatagggaaggaatgaacatcgcctcgtcattcaaacgccgg
cgcgagaagcgcgtactcgccaacgtcgaaagtcgaggagacgcgcaaggcgtgcattcc
gcgagaccactaagcggcgacagaggtgcgggccgcgtcacaaacgatcagtag
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